{"id":"W2412327281","doi":"10.1093/femsle/fnv093","title":"<i>AsaGEI2b</i>: a new variant of a genomic island identified in the<i>Aeromonas salmonicida</i>subsp.<i>salmonicida</i>JF3224 strain isolated from a wild fish in Switzerland","year":2015,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Aeromonas salmonicida; Biology; Salmo; Aeromonas; Genomic island; Genetics; Plasmid; Virulence; Genotyping; Genome; Microbiology; genomic DNA; Locus (genetics); Gene; Genotype; Bacteria; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007962713,0.0006221259,0.0003583316,0.0004973308,0.0002333591,0.0003738446,0.0002721203,0.0005253735,0.0006899564],"category_scores_gemma":[0.0002968147,0.0001921009,0.0004659178,0.0005656376,0.0002870702,0.0001555168,0.0003271826,0.0005133379,0.0003452991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002020917,"about_ca_system_score_gemma":0.0001986727,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003561147,"about_ca_topic_score_gemma":0.003882708,"domain_scores_codex":[0.9998451,0.00001288342,0.00001191621,0.00005080729,0.00004277554,0.00003648643],"domain_scores_gemma":[0.9997026,0.00002746653,0.0001311557,0.00002985754,0.00003368223,0.00007512552],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002717163,0.00004449017,0.01588915,0.00006050865,0.00003279902,0.0007546016,0.0001468647,0.00007975192,0.9803408,0.00003171054,0.0001055762,0.002241902],"study_design_scores_gemma":[0.00006003334,0.0009155209,0.7978789,0.00004322571,0.0001386054,0.009106984,0.0006591804,0.001288963,0.1834747,0.0000797484,0.006283966,0.00007020857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983038,0.0001681653,0.000612015,0.00003006326,0.00001257502,0.0000209261,0.0005569885,0.00002238261,0.0002730232],"genre_scores_gemma":[0.9941372,0.0001200339,0.001955278,0.00005227405,0.00001804286,0.00003052377,0.002994071,0.00002926537,0.0006633761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003561147,"threshold_uncertainty_score":0.007080793,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01384277028333765,"score_gpt":0.213884584760818,"score_spread":0.2000418144774803,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}