{"id":"W2414289123","doi":"10.1186/s13059-016-0985-1","title":"The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence","year":2016,"lang":"en","type":"article","venue":"Genome biology","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":188,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency; Agriculture and Agri-Food Canada","funders":"Natural Environment Research Council; Biotechnology and Biological Sciences Research Council; European Cooperation in Science and Technology; Sight Research UK; Wellcome Trust; Wellcome","keywords":"Biology; Parasitism; Nematode; Globodera pallida; Virulence; Globodera rostochiensis; Potato cyst nematode; Genome; Genetics; Human genetics; Evolutionary biology; Gene; Solanaceae; Ecology; Host (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006117734,0.0003268895,0.0001574717,0.0002901993,0.0001289476,0.0001783893,0.0001305551,0.0002441655,0.0006460337],"category_scores_gemma":[0.0001591333,0.0001055736,0.000218349,0.0004369208,0.0001087255,0.0001782723,0.0001568336,0.0003572985,0.0002952728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002405621,"about_ca_system_score_gemma":0.0002542063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002019568,"about_ca_topic_score_gemma":0.003951218,"domain_scores_codex":[0.9999627,0.000002869905,0.000001942004,0.00001796995,0.000007763507,0.000006798583],"domain_scores_gemma":[0.9998888,0.00002947412,0.00003637549,0.00001224339,0.0000140039,0.00001918155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002400108,0.0000301857,0.0095033,0.000278699,0.00002812847,0.0001587919,0.0001287772,0.0004150103,0.9807041,0.00009577227,0.0002102098,0.008206937],"study_design_scores_gemma":[0.00004353323,0.0004069918,0.856019,0.00009200257,0.0002839405,0.001455485,0.0003827813,0.002972437,0.1196769,0.0005280304,0.01811248,0.00002638438],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882165,0.001021757,0.001928047,0.0001117356,0.000009026031,0.00002175115,0.007640565,0.0001095769,0.0009410328],"genre_scores_gemma":[0.9636088,0.001141044,0.007272916,0.00006881709,0.00001138347,0.00003242571,0.02662919,0.00006053617,0.001174757],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002019568,"threshold_uncertainty_score":0.004015684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009494869343164455,"score_gpt":0.205268444877462,"score_spread":0.1957735755342975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}