{"id":"W2414419977","doi":"10.1007/978-1-61779-555-8_4","title":"Identifying Cryptic Relationships","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Genome-wide association study; Population stratification; Biology; Species complex; Computational biology; Genetic association; Population; Genetics; Single-nucleotide polymorphism; Genotype; Gene; Demography; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01073287,0.0009901942,0.001667318,0.003518019,0.001848373,0.00322323,0.001683956,0.001830586,0.004021313],"category_scores_gemma":[0.05444968,0.0005930038,0.0007704496,0.004300076,0.001731371,0.003573997,0.002894224,0.002099353,0.001449456],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006913586,"about_ca_system_score_gemma":0.001491576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001239988,"about_ca_topic_score_gemma":0.001954667,"domain_scores_codex":[0.9893762,0.004107278,0.0008970166,0.003308464,0.001865389,0.0004455656],"domain_scores_gemma":[0.9566036,0.02458479,0.006616625,0.009203374,0.002314698,0.000676954],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009488626,0.0002198945,0.3113936,0.001204533,0.0007866899,0.003998108,0.003690267,0.01258333,0.02528724,0.135615,0.01283959,0.4914328],"study_design_scores_gemma":[0.0002339277,0.0002679565,0.1186531,0.0004848074,0.0006992671,0.01233259,0.00179147,0.1309897,0.02416427,0.6279616,0.08214131,0.0002800499],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.1476389,0.002109569,0.8378076,0.00182587,0.000260107,0.0001852598,0.002427013,0.001061636,0.006684088],"genre_scores_gemma":[0.6235163,0.0009490867,0.3680737,0.0008622459,0.000216391,0.0002102208,0.002824643,0.0003079361,0.003039522],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01073287,"threshold_uncertainty_score":0.05676156,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1099853943750508,"score_gpt":0.4144777163008773,"score_spread":0.3044923219258265,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}