{"id":"W2414591621","doi":"10.5598/imafungus.2015.06.02.13","title":"Draft genome sequences of Ceratocystis eucalypticola, Chrysoporthe cubensis, C. deuterocubensis, Davidsoniella virescens, Fusarium temperatum, Graphilbum fragrans, Penicillium nordicum, and Thielaviopsis musarum","year":2015,"lang":"en","type":"article","venue":"IMA Fungus","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"University of Pretoria","keywords":"Biology; Ceratocystis; Genome; Botany; Fusarium; Taxonomy (biology); Genetics; Gene; Fungus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003040059,0.0004589458,0.000535047,0.0001377616,0.0001884904,0.00009659891,0.0003472095,0.000343179,0.00002312464],"category_scores_gemma":[0.0001332939,0.0004101046,0.0002323746,0.0002370914,0.0003225335,0.00002367822,0.0002231121,0.000202092,0.00001597489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002348433,"about_ca_system_score_gemma":0.0002550192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002643019,"about_ca_topic_score_gemma":0.0001384216,"domain_scores_codex":[0.9975264,0.0001526515,0.0005528814,0.0007866746,0.0004111416,0.0005702375],"domain_scores_gemma":[0.9982519,0.00004004156,0.0002075268,0.0006505949,0.0003592399,0.0004906589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002255395,0.0001413538,0.02812284,0.00008134714,0.000150713,0.0001155802,0.0001298269,0.00003696544,0.9685779,0.00006565103,0.001925574,0.0004266635],"study_design_scores_gemma":[0.004423244,0.003246652,0.149312,0.00026346,0.001218297,0.001260857,0.001647178,0.0003796517,0.7246318,0.0003018586,0.1100566,0.003258351],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9691633,0.02665037,0.0001136652,0.0002549784,0.00042817,0.0003716229,0.002432391,0.00004032472,0.000545164],"genre_scores_gemma":[0.995231,0.002167634,0.000611091,0.0004242562,0.0003918923,0.00002858782,0.0008753375,0.00005181686,0.0002183394],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2439461,"threshold_uncertainty_score":0.9998351,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0117831339956226,"score_gpt":0.227031643908823,"score_spread":0.2152485099132004,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}