{"id":"W2415749474","doi":"10.1038/srep18676","title":"Horizontal functional gene transfer from bacteria to fishes","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum","funders":"Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Horizontal gene transfer; Gene transfer; Bacteria; Biology; Computational biology; Gene; Genetics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002712613,0.0001024175,0.00008547163,0.00003750875,0.00005971141,0.00009054025,0.00007234032,0.00006408212,0.00008913336],"category_scores_gemma":[0.00005188325,0.00009841174,0.00005937311,0.00009464248,0.00003757148,0.000003860197,0.00005142346,0.00003412087,0.00002928355],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001293104,"about_ca_system_score_gemma":0.00009325476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000294485,"about_ca_topic_score_gemma":0.00005989186,"domain_scores_codex":[0.9989043,0.00001103341,0.000187617,0.0005042559,0.0002134307,0.0001793232],"domain_scores_gemma":[0.9992408,0.000002219231,0.00001608702,0.0004364928,0.00009187652,0.0002125155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001825384,0.00001728441,0.001409677,0.000001295181,0.0000144326,0.00002550851,0.00008426383,0.0003700739,0.9624678,0.000001306834,0.03491179,0.0006783172],"study_design_scores_gemma":[0.0001037168,0.00005608315,0.004898848,0.000003011183,0.000007621137,0.00006254495,0.00003669378,0.00001558207,0.7641674,0.0001222912,0.2303991,0.0001270643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9685567,0.0001991499,0.0237975,0.00007457731,0.006758729,0.0001048345,0.00001354755,0.00001792206,0.0004770406],"genre_scores_gemma":[0.9953201,0.000001280065,0.001952356,0.00004616369,0.00044469,0.00001443111,0.0004888051,0.00001367207,0.001718523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1983004,"threshold_uncertainty_score":0.4013114,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01536321022988721,"score_gpt":0.2556848914061716,"score_spread":0.2403216811762844,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}