{"id":"W2417481141","doi":"10.1093/jac/dkw175","title":"Emergence and evolution of an international cluster of MDR<i>Bacteroides fragilis</i>isolates","year":2016,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"European Society of Clinical Microbiology and Infectious Diseases; Canadian Food Inspection Agency","keywords":"Bacteroides fragilis; Biology; Microbiology; Antibiotic resistance; Pulsed-field gel electrophoresis; Tetracycline; Genetics; Multiple drug resistance; Gene; Antibiotics; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003558151,0.0002588501,0.0002554505,0.0009926235,0.0005336727,0.0006524585,0.0003425167,0.0004847478,0.001389198],"category_scores_gemma":[0.000929912,0.000170716,0.0002419418,0.0007394123,0.0002479153,0.0002633468,0.0005488853,0.0003485853,0.000378097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004207607,"about_ca_system_score_gemma":0.0002897075,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003440704,"about_ca_topic_score_gemma":0.00194003,"domain_scores_codex":[0.9995246,0.00004558768,0.0000420451,0.0001747809,0.00008293321,0.0001300705],"domain_scores_gemma":[0.999249,0.00008436133,0.0003134368,0.00006528121,0.0001470784,0.0001407834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001236362,0.0002562188,0.6515346,0.0001538371,0.0000716975,0.003154365,0.001760104,0.0002478863,0.3117044,0.0002266836,0.0005343469,0.02911948],"study_design_scores_gemma":[0.00003096466,0.0005602323,0.9729791,0.00003477063,0.00008556165,0.008600178,0.001043508,0.0003965041,0.01366187,0.00006149659,0.002522655,0.0000232288],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990649,0.0001266276,0.0001817484,0.00003005452,0.000003330962,0.0000153244,0.0001044237,0.000009999382,0.0004636577],"genre_scores_gemma":[0.9986178,0.00008194452,0.0006112507,0.0000334244,0.0000106298,0.0000144976,0.0003948332,0.000005992911,0.0002297639],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003440704,"threshold_uncertainty_score":0.006841362,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00698543596295004,"score_gpt":0.2470016187785066,"score_spread":0.2400161828155566,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}