{"id":"W2417941126","doi":"10.1093/infdis/jiw240","title":"Molecular Evolution of a<i>Klebsiella pneumoniae</i>ST278 Isolate Harboring<i>bla</i><sub>NDM-7</sub>and Involved in Nosocomial Transmission","year":2016,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Calgary Laboratory Services","keywords":"Klebsiella pneumoniae; Biology; Plasmid; Tigecycline; Microbiology; Mobile genetic elements; Gene; Carbapenem; Phylogenetic tree; Antibiotics; Genetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001451128,0.0002687623,0.0002461307,0.0005317167,0.0004924618,0.0004631529,0.0003138806,0.000472915,0.0003933771],"category_scores_gemma":[0.0004876739,0.00020806,0.0002907377,0.000853147,0.0002473934,0.000140155,0.0003246299,0.0004986093,0.0002844726],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007612134,"about_ca_system_score_gemma":0.0006082202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01961911,"about_ca_topic_score_gemma":0.01924172,"domain_scores_codex":[0.9997796,0.00002400432,0.00001691926,0.00005580442,0.00006086988,0.00006273176],"domain_scores_gemma":[0.9997281,0.00005348474,0.00006602267,0.00002239622,0.00006408383,0.00006579024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004558792,0.0002442483,0.1736245,0.000114536,0.00007638543,0.004701673,0.001220041,0.001007839,0.8061373,0.0003020532,0.0003587021,0.01175679],"study_design_scores_gemma":[0.00002174987,0.0006065749,0.8882217,0.00004175169,0.0001536481,0.008231461,0.002109316,0.00400405,0.09220182,0.0001254714,0.004233601,0.00004888115],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990301,0.00006065001,0.0001674642,0.00003154633,0.000003594527,0.00001138187,0.0002703915,0.000005450579,0.0004194535],"genre_scores_gemma":[0.9971777,0.0002114083,0.00103809,0.00005714334,0.000006637945,0.00000702535,0.001058781,0.00001402313,0.0004291225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01961911,"threshold_uncertainty_score":0.03900981,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003484775780860071,"score_gpt":0.2075407394643265,"score_spread":0.2040559636834664,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}