{"id":"W2418443730","doi":"10.1007/978-1-60327-414-2_9","title":"Modeling and Analysis of ChIP-Chip Experiments","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chip; Computer science; Embedded system; Telecommunications","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006945041,0.0003182045,0.001312609,0.0006195386,0.0000233851,0.000008399634,0.0002960055,0.0006490932,0.00001005177],"category_scores_gemma":[0.0001420153,0.0002760986,0.0004360207,0.0006230348,0.00007694644,0.000001157355,0.0001544912,0.0001810812,4.178875e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000204003,"about_ca_system_score_gemma":0.00009102246,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001146638,"about_ca_topic_score_gemma":0.000003544377,"domain_scores_codex":[0.9969966,0.001327016,0.0006567565,0.0007200308,0.00006743525,0.0002321046],"domain_scores_gemma":[0.9989744,0.00002611739,0.0002611486,0.0006317564,0.00004214263,0.00006446633],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001107586,0.0000437968,0.00002121692,0.0002769993,0.0005717386,0.000001318698,0.00001834358,0.000132767,0.1796898,0.0002493342,0.00000517146,0.8189784],"study_design_scores_gemma":[0.0008556805,0.0005404805,0.00003900932,0.001427706,0.005126242,0.00002005022,0.00006967189,0.004838261,0.0632222,0.001177249,0.9211541,0.001529291],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001962592,0.6343257,0.3650681,0.000004158504,0.00005580169,0.0001701561,0.00001136741,0.000003556196,0.0001648319],"genre_scores_gemma":[0.0001312057,0.8481082,0.1511282,0.00005739558,0.00002780907,0.00007369707,0.0004101209,0.00002414239,0.00003920889],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.921149,"threshold_uncertainty_score":0.9999691,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08258282399671026,"score_gpt":0.4827415392495262,"score_spread":0.400158715252816,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}