{"id":"W2419658766","doi":"10.1097/pas.0000000000000675","title":"Recurrent NTRK1 Gene Fusions Define a Novel Subset of Locally Aggressive Lipofibromatosis-like Neural Tumors","year":2016,"lang":"en","type":"article","venue":"The American Journal of Surgical Pathology","topic":"Soft tissue tumor case studies","field":"Medicine","cited_by":237,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute","keywords":"Fusion gene; Pathology; Biology; Fluorescence in situ hybridization; ROS1; Gene rearrangement; ETV6; S100 protein; Gene; CD34; Immunohistochemistry; Medicine; Chromosome; Genetics; Cancer; Chromosomal translocation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006096166,0.0002586581,0.001316162,0.0002067262,0.00008792935,0.000004400108,0.0002991594,0.00004328346,0.0001039936],"category_scores_gemma":[0.0006137319,0.0001233053,0.0003807297,0.0004503214,0.002201867,0.00005103718,0.0001904497,0.0003663964,0.00002098888],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006368344,"about_ca_system_score_gemma":0.0001536375,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001535122,"about_ca_topic_score_gemma":0.000002893908,"domain_scores_codex":[0.997561,0.0003160087,0.0009656027,0.0002355778,0.0004824759,0.0004393598],"domain_scores_gemma":[0.9958009,0.001155172,0.001908452,0.0004023538,0.0004625814,0.0002705178],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","study_design_scores_codex":[0.02860512,0.002972882,0.1074289,0.0001554545,0.00148003,0.0786372,0.00349298,0.00005366134,0.5346532,0.0009703059,0.005703158,0.235847],"study_design_scores_gemma":[0.01851508,0.0281461,0.4622616,0.00246885,0.00148329,0.4647852,0.002389086,0.00006852216,0.01218256,0.0005944384,0.006246577,0.0008586782],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872675,0.00247679,0.0003131959,0.009291636,0.0003158844,0.000167053,0.00004910352,0.00002159913,0.00009722463],"genre_scores_gemma":[0.996717,0.001339393,0.00117928,0.000358334,0.0003132434,0.000007113073,0.000002113128,0.00003117256,0.00005239477],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5224707,"threshold_uncertainty_score":0.811287,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02039203218866599,"score_gpt":0.2815249634697448,"score_spread":0.2611329312810788,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}