{"id":"W2422857679","doi":"10.3835/plantgenome2015.10.0102","title":"A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement","year":2016,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":119,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Manitoba; Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; Agriculture and Agri-Food Canada; Engineering and Physical Sciences Research Council; General Mills; U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Biology; Synteny; Genome; Genetics; Chromosome; Germplasm; Genetic linkage; Indel; Genome evolution; Single-nucleotide polymorphism; Gene; Botany; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003080384,0.0002064026,0.0002588767,0.0000191894,0.0001506411,0.00004131518,0.0003271386,0.00006629141,0.0001517566],"category_scores_gemma":[0.00002228154,0.00005415543,0.00005846617,0.0002410273,0.000147762,0.00003124094,0.00005019608,0.00008188966,0.0001156594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004976891,"about_ca_system_score_gemma":0.00002077065,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002166324,"about_ca_topic_score_gemma":0.005102158,"domain_scores_codex":[0.9984781,0.0001630007,0.0002719887,0.0003278265,0.0002634008,0.0004956655],"domain_scores_gemma":[0.9992084,0.0003716951,0.0001094242,0.0001265833,0.0000564736,0.0001274607],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007144202,0.00006426598,0.02645692,0.00001130055,0.0000440157,0.0001664169,0.00006410648,0.000003037095,0.9715424,0.00007715094,0.0005262111,0.0003297393],"study_design_scores_gemma":[0.00116837,0.0003486653,0.9642342,0.000265761,0.00006020126,0.00009720879,0.0003944708,0.000008341934,0.00883841,0.0006525409,0.02335266,0.0005792237],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918319,0.0007450893,0.000002000083,0.004894072,0.0000506306,0.0004502791,0.00180343,0.00005433503,0.0001682753],"genre_scores_gemma":[0.9985249,0.0003887159,0.00001860785,0.000236277,0.0001032018,0.00002957796,0.0001512988,0.000002331614,0.0005450575],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.962704,"threshold_uncertainty_score":0.2847124,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02540459124492391,"score_gpt":0.189807358989342,"score_spread":0.1644027677444181,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}