{"id":"W2428862094","doi":"10.1128/jb.00322-16","title":"The Conserved Tetratricopeptide Repeat-Containing C-Terminal Domain of Pseudomonas aeruginosa FimV Is Required for Its Cyclic AMP-Dependent and -Independent Functions","year":2016,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; Western University; University of Toronto; McMaster University","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Center for Research Resources; National Institute of General Medical Sciences; Government of Canada","keywords":"Tetratricopeptide; Biology; Mutant; Pilus; Cell biology; C-terminus; Intracellular; Cytoplasm; Pseudomonas aeruginosa; Biochemistry; Gene; Virulence; Genetics; Bacteria; Amino acid","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006198928,0.0002821546,0.00018027,0.00007775038,0.0001851558,0.000169634,0.0002219787,0.0003179265,0.001108513],"category_scores_gemma":[0.0001979208,0.00009353348,0.0001894645,0.0001005703,0.0002396421,0.0001501695,0.0002109329,0.0004116844,0.0006331285],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003220801,"about_ca_system_score_gemma":0.000268873,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001201966,"about_ca_topic_score_gemma":0.001106418,"domain_scores_codex":[0.9999118,0.00001327452,0.000006830021,0.00001447381,0.00003104981,0.00002265883],"domain_scores_gemma":[0.9998034,0.00004483703,0.00006445556,0.00002017841,0.00001934794,0.0000478136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005953754,0.000008158428,0.0002103908,0.0000183291,0.000001651124,0.00008423103,0.00000933847,0.0000401539,0.99907,0.00003892191,0.00001702829,0.0004423193],"study_design_scores_gemma":[0.00003513911,0.0002231796,0.02956896,0.00001165181,0.000013814,0.001832523,0.00006334752,0.001743141,0.9636821,0.00009696409,0.002717507,0.00001163946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981035,0.000267116,0.00102099,0.00004293313,0.000007387014,0.00001198723,0.0001557326,0.00004000197,0.0003503091],"genre_scores_gemma":[0.9975008,0.00007826441,0.001292599,0.00002755755,0.000005748519,0.00001452201,0.0005326524,0.00001459607,0.000533169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001201966,"threshold_uncertainty_score":0.003708422,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01820563198726283,"score_gpt":0.256145638163414,"score_spread":0.2379400061761511,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}