{"id":"W2435062719","doi":"10.1385/0-89603-535-2:33","title":"Molecular Diagnosis of Chlamydia trachomatis Infections by Probe Hybridization, PCR, LCR, TMA, and Q-β Replicase","year":2003,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; St. Joseph's Hospital","funders":"","keywords":"Ligase chain reaction; NASBA; Chlamydia trachomatis; Biology; Molecular biology; Nucleic acid; Nucleic Acid Amplification Tests; Polymerase chain reaction; Virology; Molecular beacon; False positive paradox; Immunoassay; Antigen; Gene; Antibody; RNA; Multiplex polymerase chain reaction; Oligonucleotide; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020829,0.000249132,0.0003340357,0.0002473855,0.000262457,0.00003061418,0.0001287172,0.0001612669,0.0006893195],"category_scores_gemma":[0.0009394378,0.0002450804,0.0001053437,0.0005867865,0.0004778084,0.0002299417,0.000017993,0.0002618201,0.0000448555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003222744,"about_ca_system_score_gemma":0.0001566132,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001522908,"about_ca_topic_score_gemma":0.00001283563,"domain_scores_codex":[0.9979684,0.0005213143,0.0004344804,0.0006125352,0.0000975513,0.0003657003],"domain_scores_gemma":[0.9986041,0.000360716,0.0001138694,0.0005511972,0.0002767445,0.00009336899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001271602,0.005646,0.5311534,0.0003193928,0.0009780431,0.00002571138,0.0004822765,0.00009750711,0.4335442,0.005751913,0.006942911,0.01493155],"study_design_scores_gemma":[0.003263309,0.0007092559,0.2265087,0.00007608607,0.000539889,0.0002409434,0.0002896701,0.000007271597,0.7425373,0.002337967,0.02278843,0.0007011872],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9792359,0.01302817,0.005251806,0.000201077,0.0001410026,0.0008223891,0.0004682299,0.0001512782,0.0007001248],"genre_scores_gemma":[0.9980068,0.0007005389,0.0001030807,0.00006935763,0.0000102923,0.0004356895,0.0002751035,0.00003890838,0.0003602304],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3089932,"threshold_uncertainty_score":0.9994087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008583460878617354,"score_gpt":0.2570300038698122,"score_spread":0.2484465429911948,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}