{"id":"W2437916838","doi":"10.3389/fpls.2016.00828","title":"The RNA Structure of cis-acting Translational Elements of the Chloroplast psbC mRNA in Chlamydomonas reinhardtii","year":2016,"lang":"en","type":"article","venue":"Frontiers in Plant Science","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Concordia University; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University","keywords":"Chlamydomonas reinhardtii; Pseudoknot; Translation (biology); Biology; Chlamydomonas; RNA; Cell biology; Internal ribosome entry site; Ribosome; Protein biosynthesis; Five prime untranslated region; Messenger RNA; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001319852,0.0002161158,0.0002353368,0.0002711533,0.0004161812,0.00029268,0.0002065095,0.000276184,0.0003033133],"category_scores_gemma":[0.0005122252,0.0002598696,0.0002947921,0.0002067065,0.0002749617,0.0001667658,0.0001600617,0.0004636002,0.0002106489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006832646,"about_ca_system_score_gemma":0.0004480855,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005119244,"about_ca_topic_score_gemma":0.007447357,"domain_scores_codex":[0.9998333,0.00001322233,0.00001284297,0.00006821268,0.00005268107,0.00001960469],"domain_scores_gemma":[0.9997451,0.00005039532,0.00008548499,0.0000342361,0.000041303,0.00004344896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007991771,0.00000826646,0.001070852,0.00003185888,0.000005527148,0.00008678064,0.00007630014,0.000414583,0.9970415,0.0001696565,0.00002226251,0.0009924143],"study_design_scores_gemma":[0.00002418893,0.0003148785,0.1108879,0.00003363361,0.00006887932,0.0005535517,0.0002285925,0.006296267,0.8785554,0.000424895,0.002562626,0.00004914243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974483,0.0008034764,0.001191909,0.0000292424,0.00001425579,0.00000517941,0.0002119359,0.00002594167,0.0002697642],"genre_scores_gemma":[0.9968905,0.0002353521,0.001589242,0.00002547547,0.000005488489,0.000008978474,0.0006652498,0.00001788069,0.0005618259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005119244,"threshold_uncertainty_score":0.01017886,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005469917224322909,"score_gpt":0.2148726836497588,"score_spread":0.2094027664254359,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}