{"id":"W2438810925","doi":"10.1186/s13100-016-0067-7","title":"Distribution of the DNA transposon family, Pokey in the Daphnia pulex species complex","year":2016,"lang":"en","type":"article","venue":"Mobile DNA","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Daphnia pulex; Biology; Transposable element; Genetics; Ribosomal DNA; Lineage (genetic); Ribosomal RNA; Daphnia; Pulex; Genome; Phylogenetics; Evolutionary biology; Gene; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009812653,0.0002015083,0.0001678432,0.001301606,0.0003240139,0.0003535006,0.0001903184,0.0002642918,0.0006560241],"category_scores_gemma":[0.0002672009,0.0001307128,0.0001160591,0.0005546377,0.0003041638,0.0002772876,0.000402935,0.0001909118,0.0001594021],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004284015,"about_ca_system_score_gemma":0.000155613,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001529373,"about_ca_topic_score_gemma":0.003091918,"domain_scores_codex":[0.9998435,0.000008113654,0.00001352261,0.00009050301,0.00002048846,0.00002393966],"domain_scores_gemma":[0.9997029,0.00005022326,0.0001255395,0.00002132545,0.00004383083,0.00005625393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000273161,0.00002914167,0.3984504,0.0001543371,0.00005830644,0.0002694022,0.001042266,0.0002094795,0.5879902,0.0001524708,0.0000774696,0.01129341],"study_design_scores_gemma":[0.000005368282,0.0001108056,0.9872311,0.000008026309,0.00002821281,0.0006484531,0.000451155,0.0002154401,0.01001399,0.00004954474,0.001231438,0.000006410579],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988945,0.0002345519,0.000207891,0.000008071003,0.000001150471,0.000005463754,0.0002592823,0.00001057042,0.0003784937],"genre_scores_gemma":[0.9987202,0.0001299395,0.000407164,0.00001449921,0.000001422786,0.00000961713,0.0004657559,0.00000277914,0.0002487456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001529373,"threshold_uncertainty_score":0.003108323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01188421760840572,"score_gpt":0.2295487609979445,"score_spread":0.2176645433895388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}