{"id":"W2444465672","doi":"10.1101/059311","title":"The genetic structure of the world’s first farmers","year":2016,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Winnipeg; Simon Fraser University","funders":"Medical Research Council; National Institutes of Health; Università degli Studi di Pavia; Chinese Academy of Sciences; National Geographic Society; Bundesministerium für Bildung und Forschung; Irish Research Council; Deutsche Forschungsgemeinschaft; Chief Scientist Office, Scottish Government Health and Social Care Directorate; Wenner-Gren Foundation; Leverhulme Trust; Scottish Funding Council; Ministero dell’Istruzione, dell’Università e della Ricerca; Scottish Government; National Natural Science Foundation of China; Irish Research Council for the Humanities and Social Sciences; National Science Foundation","keywords":"Pastoralism; Steppe; Geography; Neanderthal; Southern Levant; Bronze Age; Ancient DNA; Lineage (genetic); Middle East; Archaeology; Ancient history; Livestock; History; Biology; Demography; Population; Forestry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002090605,0.0003725579,0.0002715081,0.00006331722,0.0003117319,0.00007983272,0.001318078,0.0003863754,0.00003264126],"category_scores_gemma":[0.0002137167,0.0002102671,0.0002382815,0.0002396889,0.0006989031,0.000002086524,0.001229617,0.0004114481,0.000009173855],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005014142,"about_ca_system_score_gemma":0.0005941453,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002281369,"about_ca_topic_score_gemma":0.00007924972,"domain_scores_codex":[0.9978134,0.0001568635,0.0004013182,0.0006733673,0.0004317057,0.0005233344],"domain_scores_gemma":[0.9969532,0.00004747377,0.0003207667,0.002148006,0.0003943898,0.0001361923],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004290144,0.00001818751,0.009325142,0.0001030776,0.0001879056,0.000002121086,0.000002601207,0.00006190966,0.985045,0.0002470375,0.004949182,0.0000149149],"study_design_scores_gemma":[0.0002856764,0.00004644513,0.1246247,0.0001344403,0.00004529971,2.275177e-8,0.000002088515,0.00001763197,0.7916754,0.00001587386,0.08283182,0.0003205551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992474,0.003772548,0.0002815545,0.001016569,0.001372245,0.0007046697,0.0003083168,0.00002030146,0.00004980994],"genre_scores_gemma":[0.9977763,0.0007135361,0.0005038991,0.000114756,0.0005694621,0.00004346949,2.712807e-7,0.0000747025,0.0002036159],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1933695,"threshold_uncertainty_score":0.8574443,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007323216855273972,"score_gpt":0.2229335030843502,"score_spread":0.2156102862290762,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}