{"id":"W2461121776","doi":"10.1128/aac.00726-16","title":"Molecular Epidemiology of a Vancomycin-Intermediate Heteroresistant Staphylococcus epidermidis Outbreak in a Neonatal Intensive Care Unit","year":2016,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; McGill University Health Centre; Institut National de Santé Publique du Québec; University of Manitoba; Montreal Children's Hospital; McGill University","funders":"","keywords":"Pulsed-field gel electrophoresis; Etest; Outbreak; Neonatal intensive care unit; Staphylococcus epidermidis; Medicine; Intensive care; Vancomycin; Microbiology; Molecular epidemiology; Intensive care unit; Methicillin-resistant Staphylococcus aureus; Population; Staphylococcus aureus; Virology; Pediatrics; Intensive care medicine; Biology; Antibiotics; Genotype; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005651359,0.0003940026,0.0003827609,0.001712071,0.0009280055,0.00106181,0.0008360759,0.0006187175,0.0007182047],"category_scores_gemma":[0.001726448,0.0002992267,0.0002967069,0.001366581,0.0008243462,0.0003762858,0.0006437853,0.0005096887,0.0001296846],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004064636,"about_ca_system_score_gemma":0.003009264,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.3474454,"about_ca_topic_score_gemma":0.2877297,"domain_scores_codex":[0.9990284,0.0001241931,0.0001228158,0.0002307633,0.0003031215,0.000190676],"domain_scores_gemma":[0.9977409,0.0002216559,0.0007537159,0.00007210078,0.0007257392,0.0004859375],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008565078,0.00004550823,0.9902256,0.00002867391,0.0000285822,0.001392252,0.0007119971,0.000150674,0.004619132,0.00002544031,0.0001211111,0.002565362],"study_design_scores_gemma":[0.000002101045,0.00008175778,0.9972576,0.00001564851,0.00001256371,0.00085766,0.001092235,0.0002260361,0.0003282319,0.000005681928,0.0001141657,0.000006280564],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992913,0.0001150561,0.0001025868,0.00004609969,0.000002610763,0.00002516696,0.0001154811,0.000006480092,0.0002952425],"genre_scores_gemma":[0.9991,0.0001860742,0.0003151114,0.00007297297,0.00000584233,0.00001136299,0.0001928723,0.000002154695,0.0001137681],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3474454,"threshold_uncertainty_score":0.6908461,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02262201630008931,"score_gpt":0.3009477525338932,"score_spread":0.2783257362338039,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}