{"id":"W2461342062","doi":"10.1007/s12250-016-3750-4","title":"Highly pathogenic avian influenza H5N1 Clade 2.3.2.1c virus in migratory birds, 2014–2015","year":2016,"lang":"en","type":"article","venue":"Virologica Sinica","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China","keywords":"Clade; Influenza A virus subtype H5N1; Biology; Phylogenetic tree; Outbreak; Virology; Highly pathogenic; Avian influenza virus; Bird migration; Virus; Zoology; Gene; Genetics; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001016604,0.0004953564,0.0009556839,0.0005014633,0.0001884574,0.00003057762,0.000527202,0.0005337525,0.0007953928],"category_scores_gemma":[0.002178731,0.0002965677,0.0003050441,0.0005221841,0.0008559764,0.0002208458,0.0004632937,0.000728664,0.004223702],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000325114,"about_ca_system_score_gemma":0.0003250099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000225022,"about_ca_topic_score_gemma":0.0003295137,"domain_scores_codex":[0.9955219,0.0004613028,0.0009879312,0.0009585427,0.0007921691,0.001278138],"domain_scores_gemma":[0.9971209,0.0007635977,0.0002337764,0.001204761,0.0002112114,0.0004657951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002368007,0.0007926674,0.1872769,0.00006771026,0.000225834,0.000683239,0.0002663862,0.000003075446,0.747797,0.0003644003,0.04565701,0.01449779],"study_design_scores_gemma":[0.004438682,0.001371596,0.5578831,0.000138601,0.00006252707,0.0000284788,0.00004369544,0.000006949293,0.006417562,0.0004701139,0.4287279,0.0004108078],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9792097,0.007680493,0.00001681998,0.007052157,0.0002182841,0.0009489558,0.0001344131,0.0003601649,0.004379059],"genre_scores_gemma":[0.9837562,0.003759026,0.0005647885,0.01027265,0.0003496484,0.0002284796,0.000006865459,0.00007329081,0.0009890408],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7413794,"threshold_uncertainty_score":0.9999486,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0780653643176713,"score_gpt":0.3694599477919566,"score_spread":0.2913945834742853,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}