{"id":"W2462852581","doi":"10.1007/s00203-016-1219-3","title":"The flagellin hypervariable region is a potential flagella display domain in probiotic Escherichia coli strain Nissle 1917","year":2016,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Flagellin; Hypervariable region; Flagellum; Biology; Escherichia coli; Mutant; Microbiology; Heterologous; Strain (injury); Plasmid; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001955699,0.0002135644,0.0002558326,0.00007188015,0.00009646227,0.00001232763,0.0005149272,0.0003443712,0.00001548442],"category_scores_gemma":[0.00004493115,0.0001310793,0.0001225198,0.00009439276,0.0007906404,0.000002554971,0.0002980373,0.0001287308,0.00001129562],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008238568,"about_ca_system_score_gemma":0.00008843834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002810096,"about_ca_topic_score_gemma":0.0001378659,"domain_scores_codex":[0.9984081,0.0002168942,0.000393037,0.0004722801,0.00003172874,0.0004779863],"domain_scores_gemma":[0.9991658,0.00006758213,0.0001733934,0.0005194725,0.00002457428,0.00004921266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003517256,0.00007306,0.0003661882,0.00001382469,0.00005414642,0.000006426404,0.00006320715,0.000003877222,0.9933059,0.0004975124,0.0004312867,0.004832897],"study_design_scores_gemma":[0.001177491,0.0005429939,0.001145174,0.00004181838,0.00001329504,0.00006034411,0.00005534117,0.0000104677,0.9123527,0.001951254,0.08242743,0.0002216505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945126,0.000495336,0.001882329,0.00205196,0.0002372038,0.0003329264,0.0001629375,0.000009799893,0.000314862],"genre_scores_gemma":[0.9945699,0.001741949,0.002281199,0.0001766425,0.0001148434,0.00001703021,0.00008829424,0.00002476413,0.0009853947],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08199614,"threshold_uncertainty_score":0.5345259,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004604840936667467,"score_gpt":0.1923300281581605,"score_spread":0.187725187221493,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}