{"id":"W2464739734","doi":"10.1371/journal.pgen.1006173","title":"Gene Regulation in Developing Chloroplasts Disentangled","year":2016,"lang":"en","type":"letter","venue":"PLoS Genetics","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Concordia University","funders":"","keywords":"Plastid; Biology; Chloroplast; Endosymbiosis; Genome; Cell biology; Gene; Botany; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00007841253,0.0003487879,0.0002868059,0.0001067121,0.00004701864,0.00002849591,0.0003474827,0.0008328862,0.00004651073],"category_scores_gemma":[0.00004377051,0.0003105415,0.0000916206,0.00009177324,0.00004760176,0.000002394739,0.0001970563,0.0002565054,0.00004104516],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006876454,"about_ca_system_score_gemma":0.0002230097,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000136769,"about_ca_topic_score_gemma":0.00001969048,"domain_scores_codex":[0.9981848,0.00005202092,0.0003513788,0.0006244967,0.0002837123,0.000503568],"domain_scores_gemma":[0.999124,0.00001651457,0.0001727846,0.0005316925,0.0001013885,0.00005365028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002836481,0.00002116337,0.00006123369,0.0001340258,0.00006392146,0.00004779679,0.00001876994,0.000004629721,0.964717,0.00001188331,0.0339053,0.0009859453],"study_design_scores_gemma":[0.0002728312,0.00005335844,0.00001267493,0.0001094465,0.00002419196,0.00001646379,0.00000193396,0.00004496436,0.651972,0.0004288556,0.346747,0.0003163301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"commentary","genre_scores_codex":[0.6259559,0.003542807,0.01669212,0.3446451,0.00263813,0.002461564,0.0006462122,0.0001441186,0.003274066],"genre_scores_gemma":[0.4080827,0.006621486,0.006365734,0.5463933,0.01831516,0.0004916972,0.004677058,0.000640609,0.008412206],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.3128417,"threshold_uncertainty_score":0.9999347,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01544989134923085,"score_gpt":0.2281886324865681,"score_spread":0.2127387411373373,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}