{"id":"W2464931027","doi":"10.1002/cncr.30179","title":"Subsets of salivary duct carcinoma defined by morphologic evidence of pleomorphic adenoma, <i>PLAG1</i> or <i>HMGA2</i> rearrangements, and common genetic alterations","year":2016,"lang":"en","type":"article","venue":"Cancer","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network","funders":"National Cancer Institute","keywords":"HRAS; HMGA2; Pleomorphic adenoma; Fluorescence in situ hybridization; Pathology; Biology; Adenoma; Carcinoma; Sarcoma; Cancer research; Cancer; Salivary gland; Medicine; KRAS; Gene; Chromosome; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008900653,0.0001780928,0.000440033,0.00006242628,0.00004560431,0.000005969665,0.0000861768,0.00006182859,0.0006110626],"category_scores_gemma":[0.00006204368,0.0001028456,0.00006421522,0.0001449881,0.000147616,0.00007396952,0.00004377115,0.00005308616,0.000007895742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008005298,"about_ca_system_score_gemma":0.0001119397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001171691,"about_ca_topic_score_gemma":0.0001894221,"domain_scores_codex":[0.9988467,0.00006337149,0.0003776673,0.0002985454,0.0002099152,0.0002038582],"domain_scores_gemma":[0.9989536,0.0002817778,0.0001829948,0.0003634105,0.00009609665,0.0001220903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004274639,0.0002789503,0.9510034,0.0001640223,0.0001085876,0.0001017376,0.0001139958,8.792981e-7,0.03465563,0.00002988544,0.0115492,0.001566284],"study_design_scores_gemma":[0.003354461,0.00118756,0.8985819,0.001077791,0.0004257463,0.0001362899,0.00003276931,0.000007959029,0.09454256,0.0000670138,0.0004241616,0.0001617905],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9665419,0.03051282,0.00002049415,0.001968595,0.0001098596,0.0004450014,0.0002867882,0.00001714526,0.00009737557],"genre_scores_gemma":[0.9918327,0.006885294,0.0002868651,0.0004311472,0.00006226154,0.0001523745,0.00002721665,0.00001994364,0.0003021902],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05988693,"threshold_uncertainty_score":0.6690707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0522198390328423,"score_gpt":0.3123787993888547,"score_spread":0.2601589603560124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}