{"id":"W2466307120","doi":"10.1371/journal.pone.0158747","title":"Marked Differences in Mucosal Immune Responses Induced in Ileal versus Jejunal Peyer’s Patches to Mycobacterium avium subsp. paratuberculosis Secreted Proteins following Targeted Enteric Infection in Young Calves","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Guelph","funders":"Agriculture and Agri-Food Canada; Canadian Institutes of Health Research; Beef Cattle Research Council","keywords":"Paratuberculosis; Ileum; Biology; Microbiology; Immune system; Jejunum; Mesenteric lymph nodes; Intestinal mucosa; Recombinant DNA; Immunoglobulin A; Pathogen; Antibody; Mycobacterium; Immunology; Virology; Immunoglobulin G; Bacteria; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003015432,0.0003381328,0.0003404044,0.0005583974,0.0002489205,0.0005545864,0.0002547255,0.0005708786,0.0006252129],"category_scores_gemma":[0.0007524929,0.0003749602,0.0002509651,0.000168422,0.0004271421,0.0003996893,0.0002683416,0.0009567031,0.0002059958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004809845,"about_ca_system_score_gemma":0.0001793192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00130334,"about_ca_topic_score_gemma":0.001778162,"domain_scores_codex":[0.9996105,0.00004982705,0.00002923307,0.0001008239,0.00006249594,0.0001472877],"domain_scores_gemma":[0.9993917,0.0001311371,0.0001229962,0.00002327917,0.00006092447,0.0002700767],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007890996,0.0001132083,0.0173036,0.00007087539,0.00001755856,0.0005548817,0.0003413036,0.00003543298,0.9791053,0.00003330964,0.00001694785,0.001618541],"study_design_scores_gemma":[0.00004568027,0.003058978,0.8555811,0.00002747048,0.00008075732,0.002236557,0.000928599,0.0002934024,0.1371308,0.00007073783,0.0005260977,0.00001987441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994773,0.000166777,0.0001318558,0.000007489333,0.000002623871,0.000005140843,0.00004146957,0.000004002325,0.0001633315],"genre_scores_gemma":[0.9990504,0.0001742722,0.0001757761,0.00002826143,0.000004644533,0.00001352547,0.0001319076,0.000005161594,0.0004161806],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00130334,"threshold_uncertainty_score":0.003489792,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06136099916805555,"score_gpt":0.2858042694186994,"score_spread":0.2244432702506439,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}