{"id":"W2468135598","doi":"10.1186/s12864-016-2788-x","title":"Variants in CCL16 are associated with blood plasma and cerebrospinal fluid CCL16 protein levels","year":2016,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute on Aging; National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research; University of California, San Francisco; University of California, San Diego; National Institutes of Health; IXICO; Servier; University of California, Davis; Eisai; Genentech; Erasmus Medisch Centrum; Bundesministerium für Bildung und Forschung; Hjartavernd; Northern California Institute for Research and Education; Pfizer; Biogen; BioClinica; F. Hoffmann-La Roche; University of Pennsylvania; University of Southern California; Brigham Young University; Wellcome Trust; Synarc; National Heart, Lung, and Blood Institute; Novartis Pharmaceuticals Corporation; U.S. Department of Defense; Eli Lilly and Company; Bristol-Myers Squibb; Alzheimer's Association; Foundation for the National Institutes of Health; Medpace; Brigham and Women's Hospital; Alzheimer's Disease Neuroimaging Initiative; Medical Research Council; Meso Scale Diagnostics","keywords":"Biology; Cerebrospinal fluid; Single-nucleotide polymorphism; Gene; Chemokine; Genome-wide association study; Immune system; Genetic association; Computational biology; Genetics; Bioinformatics; Genotype; Neuroscience","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001814864,0.0008314062,0.0007424768,0.0009799373,0.0005220066,0.0009886633,0.000624969,0.001087929,0.003900954],"category_scores_gemma":[0.006940268,0.000294557,0.002111864,0.002056483,0.0005247549,0.0003253189,0.0006972705,0.0007814149,0.0002811682],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004022194,"about_ca_system_score_gemma":0.0004480541,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00399269,"about_ca_topic_score_gemma":0.00379165,"domain_scores_codex":[0.9982967,0.0005100777,0.0002361182,0.000545061,0.0002085702,0.0002035204],"domain_scores_gemma":[0.9938996,0.003149965,0.001932874,0.0004380688,0.0002834574,0.0002960068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00451601,0.00007667367,0.9588051,0.0004499144,0.006863647,0.001217043,0.0002102503,0.00101669,0.01572251,0.0003054833,0.0009195766,0.009897197],"study_design_scores_gemma":[0.0004119786,0.000391859,0.9764525,0.0002155046,0.007940785,0.003204644,0.0001980114,0.002261791,0.004972098,0.001239563,0.00266651,0.00004459887],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.98856,0.006293543,0.001671785,0.0004604463,0.00007074775,0.00001543847,0.002364508,0.00006722844,0.0004962083],"genre_scores_gemma":[0.9967618,0.0007581216,0.001022797,0.00009996384,0.0000464068,0.0000246346,0.0009844418,0.00002908459,0.0002725786],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00399269,"threshold_uncertainty_score":0.01304996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02521864665696495,"score_gpt":0.2288785460524285,"score_spread":0.2036598993954635,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}