{"id":"W2468183298","doi":"10.1038/srep29516","title":"How Escherichia coli lands and forms cell clusters on a surface: a new role of surface topography","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Division of Emerging Frontiers in Research and Innovation; Division of Materials Research; Princeton University; National Eye Institute; University of Utah; Massachusetts General Hospital; Materials Research Science and Engineering Center, Harvard University; Cornell Center for Materials Research; Danmarks Tekniske Universitet; Alfred P. Sloan Foundation; Division of Civil, Mechanical and Manufacturing Innovation; National Science Foundation","keywords":"Escherichia coli; Biophysics; Perpendicular; Mutant; Cell; Orientation (vector space); Cluster (spacecraft); Cell culture; Biofilm; Cell biology; Chemistry; Materials science; Biology; Crystallography; Geometry; Genetics; Bacteria; Biochemistry; Gene; Computer science","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008986099,0.0001944624,0.0001786061,0.00009295862,0.0001545002,0.0005074065,0.0001578386,0.0002734869,0.0003457034],"category_scores_gemma":[0.0001560776,0.0002029577,0.0001336937,0.00009879767,0.0002695863,0.0003384907,0.0002579634,0.00024751,0.0001484881],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001645861,"about_ca_system_score_gemma":0.0001780664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006150913,"about_ca_topic_score_gemma":0.001348266,"domain_scores_codex":[0.9999087,0.00001153368,0.000005064939,0.00002074768,0.00003185386,0.00002222573],"domain_scores_gemma":[0.9999231,0.0000152788,0.00001770012,0.00001184463,0.00001564774,0.00001646183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000007572263,0.000004566217,0.000291752,0.00001351609,0.00000127215,0.00001823467,0.00001814564,0.00009745988,0.9983991,0.00005186021,0.000007609755,0.001088778],"study_design_scores_gemma":[0.000005888994,0.0001815943,0.01351026,0.000005274754,0.00001121545,0.0001796703,0.0001996553,0.00550799,0.9790247,0.0001349579,0.001221823,0.00001702971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931079,0.0003204104,0.005744982,0.00008818255,0.00001060022,0.00001079469,0.00003498432,0.00002407542,0.0006579691],"genre_scores_gemma":[0.9938484,0.0002832852,0.005222469,0.00002456585,0.000002811034,0.000006754326,0.00003005422,0.000006379664,0.0005752895],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006150913,"threshold_uncertainty_score":0.001223087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005447484101795934,"score_gpt":0.1965293043094492,"score_spread":0.1910818202076533,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}