{"id":"W2468716399","doi":"10.1038/srep28980","title":"Widespread detection of highly pathogenic H5 influenza viruses in wild birds from the Pacific Flyway of the United States","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service","keywords":"Waterfowl; Influenza A virus subtype H5N1; Flyway; Highly pathogenic; Biology; Clade; Virology; Influenza A virus; Virus; Avian influenza virus; Zoology; Phylogenetics; Ecology; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000539555,0.0002041646,0.0001290469,0.0007506838,0.0007002989,0.0004577891,0.0002077383,0.0002685952,0.0004913962],"category_scores_gemma":[0.000580781,0.0001412391,0.0001062416,0.0005138161,0.0004324591,0.0002277211,0.0003137501,0.0002612451,0.00009526463],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004230629,"about_ca_system_score_gemma":0.0006637027,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.06964667,"about_ca_topic_score_gemma":0.1451,"domain_scores_codex":[0.9997037,0.00004503009,0.00002763445,0.00008693265,0.00009249361,0.00004421337],"domain_scores_gemma":[0.9994615,0.00006007658,0.0002022504,0.00002877208,0.0001506908,0.00009661997],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008691378,0.00004237504,0.9619921,0.00005874844,0.00003150689,0.0005842441,0.001101078,0.00003908991,0.02291275,0.000031543,0.0005239455,0.01259561],"study_design_scores_gemma":[0.00000164802,0.00008200181,0.9958729,0.00001949269,0.00001138316,0.0004391244,0.001070905,0.00005310982,0.001474853,0.00001094035,0.0009595467,0.000003996977],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980737,0.0004900187,0.0001504376,0.0000735715,0.000008065132,0.00001724918,0.0002447806,0.000008165845,0.0009339341],"genre_scores_gemma":[0.998351,0.0004429962,0.0004389209,0.0001127152,0.000007107098,0.000009231928,0.0004224236,0.000001376054,0.0002143228],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06964667,"threshold_uncertainty_score":0.1384825,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05370542083386057,"score_gpt":0.324372113073446,"score_spread":0.2706666922395854,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}