{"id":"W2469493284","doi":"10.1089/aid.2014.5546.abstract","title":"Longitudinal Analysis of SIVmac239 Mutations around the 12 Protease Cleavage Sites and their Correlations with Viral Load Reduction and CD4 counts","year":2014,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Human immunodeficiency virus (HIV); Clinical microbiology; Virology; Medicine; Biology; Microbiology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003854547,0.00008917435,0.0001810848,0.0002838821,0.0003968771,0.00005963188,0.00003245883,0.00003200189,0.00005146318],"category_scores_gemma":[0.00008378845,0.00005094615,0.0000246288,0.0003101906,0.0005834749,0.00008997793,0.00003132756,0.0001474528,0.000005145026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003681633,"about_ca_system_score_gemma":0.00006430253,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001201828,"about_ca_topic_score_gemma":0.000201257,"domain_scores_codex":[0.9991842,0.0000754264,0.0001251558,0.0001869431,0.000270602,0.0001576576],"domain_scores_gemma":[0.9993974,0.0001615228,0.00004128936,0.0001518373,0.0001553044,0.0000926485],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001409058,0.0001160945,0.9908234,0.00003922002,0.000689342,0.000004018905,0.001304979,0.000001456904,0.0009052097,0.003333823,0.0006769911,0.00196453],"study_design_scores_gemma":[0.001097451,0.001442772,0.9902807,0.00006921469,0.0006378979,0.00002228526,0.001681674,0.0002031452,0.001240517,0.001425962,0.001780685,0.0001176452],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968027,0.0002796098,0.00007743056,0.000233135,0.000005676016,0.0003124481,0.00001567764,0.00001211488,0.00226121],"genre_scores_gemma":[0.9956371,0.00007808881,0.0001602918,0.000008969862,0.00004207572,0.00003063865,0.00004874257,0.000007617781,0.003986543],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001907861,"threshold_uncertainty_score":0.3052498,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05646957818370853,"score_gpt":0.3394020013224667,"score_spread":0.2829324231387582,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}