{"id":"W2470645058","doi":"10.1261/rna.057158.116","title":"The RNA-binding profile of Acinus, a peripheral component of the exon junction complex, reveals its role in splicing regulation","year":2016,"lang":"en","type":"article","venue":"RNA","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"European Regional Development Fund; Canadian Institutes of Health Research; Medical Research Council; Fundación Sandra Ibarra de Solidaridad Frente al Cáncer; University of Toronto; Agència de Gestió d'Ajuts Universitaris i de Recerca; Ministerio de Economía y Competitividad; Wellcome Trust","keywords":"Biology; RNA splicing; Exon; Intron; Acinus; Alternative splicing; Cell biology; Splicing factor; RNA-binding protein; RNA; Exonic splicing enhancer; Molecular biology; Genetics; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003757963,0.00006641378,0.0001009477,0.00002420156,0.00008899571,0.000007864621,0.0001528354,0.00005174116,0.00001818307],"category_scores_gemma":[0.000115735,0.00003443463,0.00005670706,0.00008521297,0.00005685695,0.000005459365,0.00008509143,0.00004938033,0.000001749257],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003630767,"about_ca_system_score_gemma":0.00002988551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007414511,"about_ca_topic_score_gemma":0.0000876446,"domain_scores_codex":[0.9992101,0.0001044288,0.0002149095,0.0001322178,0.0001683195,0.0001700562],"domain_scores_gemma":[0.9994995,0.00003095508,0.0001338389,0.0002428023,0.0000680971,0.00002481323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001180242,0.0000147521,0.00639951,0.00001634821,0.00001052956,1.203716e-7,0.00003357597,0.00003584244,0.9875271,0.0001492829,0.0002209149,0.005473955],"study_design_scores_gemma":[0.0003356212,0.00007589914,0.1245256,0.0001090608,0.000003102316,0.000001676274,0.00007405277,0.000809203,0.8733548,0.00005520846,0.0006058611,0.00004991321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983203,0.0001312439,0.0002220229,0.0002962738,0.00005096797,0.0002604676,0.000007435328,0.000002520424,0.0007088078],"genre_scores_gemma":[0.997018,0.00005855415,0.0000596601,0.00001203723,0.00005623133,0.00001302498,0.000008716989,0.000007979714,0.002765816],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1181261,"threshold_uncertainty_score":0.1404203,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01780999228455105,"score_gpt":0.2638105061542261,"score_spread":0.246000513869675,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}