{"id":"W2472189773","doi":"10.1093/gbe/evw157","title":"Splice Sites Seldom Slide: Intron Evolution in Oomycetes","year":2016,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Intron; Biology; Genetics; Exon; Genome; Gene; RNA splicing; splice; Computational biology; Evolutionary biology; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001977249,0.000139605,0.0001423214,0.00005556298,0.00009346266,0.000003892838,0.00008815587,0.0002018764,0.000009761759],"category_scores_gemma":[0.00006540905,0.0001050207,0.00003768844,0.00006770233,0.000152442,0.00000195267,0.0001204876,0.00004567397,0.00001903839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005190604,"about_ca_system_score_gemma":0.00003215581,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005112838,"about_ca_topic_score_gemma":0.0001741785,"domain_scores_codex":[0.9990673,0.00007179884,0.0001820251,0.0003674904,0.00002992675,0.0002814228],"domain_scores_gemma":[0.9996533,0.00002300406,0.00005944275,0.0001743287,0.0000443427,0.00004558224],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004990579,0.00001321851,0.3061807,0.000004552105,0.0000194115,1.70251e-7,0.00002187039,0.000004729317,0.6918483,0.001031212,0.00004597097,0.0007800016],"study_design_scores_gemma":[0.0006960381,0.0003305711,0.9791921,0.000008523559,0.00001266295,0.000009333819,0.00006736677,0.000009282674,0.007302368,0.00535638,0.00680942,0.0002059167],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864433,0.01064509,0.002049412,0.0003101731,0.0001311966,0.0001333243,0.00003318278,0.000005768852,0.0002485122],"genre_scores_gemma":[0.9975392,0.001615227,0.0002944121,0.0000549338,0.0002754843,0.00002561735,0.00003415205,0.000009083399,0.0001519195],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6845459,"threshold_uncertainty_score":0.4282619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006793800750425192,"score_gpt":0.2233941161847243,"score_spread":0.2166003154342991,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}