{"id":"W2472436937","doi":"10.1007/s10571-016-0403-y","title":"Transcriptomic Profiling Discloses Molecular and Cellular Events Related to Neuronal Differentiation in SH-SY5Y Neuroblastoma Cells","year":2016,"lang":"en","type":"article","venue":"Cellular and Molecular Neurobiology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Seventh Framework Programme; Università degli Studi di Verona; University of Toronto","keywords":"Biology; SH-SY5Y; Transcriptome; Cellular differentiation; Cell biology; Neuroblastoma; Gene expression profiling; Neurotrophin; Retinoic acid; Neurite; Gene expression; Cytoskeleton; In vitro; Receptor; Cell culture; Cell; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002157386,0.0004549354,0.000432077,0.0002956179,0.00007496648,0.00003242573,0.0002904467,0.0003107039,0.00001465375],"category_scores_gemma":[0.00007630559,0.0003909491,0.0001756078,0.000219383,0.0001729637,0.00001685258,0.0003151857,0.0002043793,0.00001002241],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002092715,"about_ca_system_score_gemma":0.00003496334,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001225096,"about_ca_topic_score_gemma":0.00001387242,"domain_scores_codex":[0.9970731,0.0004508348,0.0005401333,0.001223102,0.0001432937,0.0005695836],"domain_scores_gemma":[0.998982,0.0000316447,0.0001280817,0.0005748168,0.0000639624,0.0002194998],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000998982,0.00009232232,0.001819755,0.00002821989,0.00005101826,0.00009204186,0.00003270896,0.00002234611,0.9964632,0.0001683928,0.00004411067,0.001086025],"study_design_scores_gemma":[0.0009695265,0.0005317563,0.001622971,0.00003362931,0.00007445816,0.00002916671,0.00001078891,0.00006425702,0.9948409,0.0003496208,0.001033444,0.0004395008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9796072,0.000540033,0.0185701,0.000391848,0.0001036361,0.0006139636,0.00001500958,0.0000517311,0.0001064746],"genre_scores_gemma":[0.9981652,0.0002724629,0.0004119006,0.0006446922,0.00002564822,0.00005808219,0.0001183969,0.00008540067,0.0002182321],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01855798,"threshold_uncertainty_score":0.9998543,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003827034534350543,"score_gpt":0.2112060025626602,"score_spread":0.2073789680283097,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}