{"id":"W2472839120","doi":"10.1186/s12866-016-0742-3","title":"Auxotrophic Actinobacillus pleurpneumoniae grows in multispecies biofilms without the need for nicotinamide-adenine dinucleotide (NAD) supplementation","year":2016,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Consejo Nacional de Ciencia y Tecnología; Universidad Autónoma de Aguascalientes","keywords":"Actinobacillus pleuropneumoniae; Microbiology; Bordetella bronchiseptica; Biofilm; Biology; Nicotinamide adenine dinucleotide; Nicotinamide mononucleotide; Streptococcus suis; NAD+ kinase; Pasteurella multocida; Bacteria; Pleuropneumonia; Staphylococcus aureus; Actinobacillus; Serotype; Biochemistry; Enzyme; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005429471,0.0003237088,0.0004255816,0.0003015247,0.0003882941,0.00003415672,0.0004225112,0.0003134066,0.001784684],"category_scores_gemma":[0.000423264,0.0001925664,0.0002208795,0.0002598285,0.0006622942,0.0001334658,0.0002060911,0.0002601701,0.0005470766],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001944775,"about_ca_system_score_gemma":0.0001657797,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009015327,"about_ca_topic_score_gemma":0.006036025,"domain_scores_codex":[0.9972735,0.0005256484,0.0005867307,0.0006023815,0.00002300907,0.0009887172],"domain_scores_gemma":[0.9983429,0.0007489226,0.0002546083,0.0004623248,0.0001423581,0.00004885816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006042699,0.0001561367,0.04811351,0.00002968245,0.0000801716,0.000001861332,0.0001221142,0.000005341661,0.938457,0.001370113,0.009893931,0.001165878],"study_design_scores_gemma":[0.01647278,0.0009614552,0.05433324,0.0001408077,0.0001285381,0.0006373661,0.001007745,0.00002054682,0.728203,0.0004482435,0.1966997,0.0009465453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925203,0.000592466,0.001399111,0.002256593,0.0007962224,0.001368559,0.000890618,0.0000908152,0.00008528218],"genre_scores_gemma":[0.9937232,0.0002011001,0.0003102828,0.0001909988,0.00009219666,0.0002885952,0.0004557223,0.00003979011,0.004698138],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.210254,"threshold_uncertainty_score":0.9991278,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02926801435506922,"score_gpt":0.2867154325223995,"score_spread":0.2574474181673303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}