{"id":"W2473612325","doi":"10.1038/srep29059","title":"Redefining the “carrier” state for foot-and-mouth disease from the dynamics of virus persistence in endemically affected cattle populations","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Persistence (discontinuity); Foot-and-mouth disease virus; Population; Outbreak; Logistic regression; Biology; Disease reservoir; Foot-and-mouth disease; Virology; Virus; Demography; Statistics; Mathematics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009472184,0.00008019805,0.0001215015,0.0000104071,0.000311674,0.00004934618,0.0001734699,0.00002676492,0.00004625375],"category_scores_gemma":[0.000921179,0.00002105901,0.00008585261,0.0002103879,0.0003469311,0.00006648686,0.0001033928,0.00003828717,0.000001318865],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002201695,"about_ca_system_score_gemma":0.00001560914,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005553875,"about_ca_topic_score_gemma":0.004953259,"domain_scores_codex":[0.9988669,0.0001077247,0.0003023279,0.0003764291,0.0001437334,0.0002028657],"domain_scores_gemma":[0.9989989,0.0005245479,0.0002017416,0.0001481915,0.00005362286,0.00007298539],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001293028,0.00006961945,0.907931,0.00001018492,0.00002773434,0.00001227262,0.0003758671,0.00004492922,0.05139174,0.004437149,0.004616315,0.03095383],"study_design_scores_gemma":[0.00005237445,0.00002010709,0.9644421,0.00002812344,0.00002638086,6.937237e-7,0.0002855945,0.0006230552,0.00004005103,0.03308252,0.001328516,0.00007042124],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937504,0.0001572672,0.00007839228,0.004969516,0.0004287852,0.000310513,0.0002197479,0.00001709293,0.00006829014],"genre_scores_gemma":[0.9991884,0.000009866339,0.00004789526,0.00007646027,0.00003215673,0.00003165842,0.0001362211,8.290138e-7,0.0004764649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05651111,"threshold_uncertainty_score":0.2764035,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05369702793398019,"score_gpt":0.2549267494259014,"score_spread":0.2012297214919212,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}