{"id":"W2475257508","doi":"10.1039/c6mb00289g","title":"Mastitomics, the integrated omics of bovine milk in an experimental model of <i>Streptococcus uberis</i> mastitis: 3. Untargeted metabolomics","year":2016,"lang":"en","type":"article","venue":"Molecular BioSystems","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; University of Glasgow; Zoetis; Scottish Government; Rural and Environment Science and Analytical Services Division; Wellcome Trust; Wellcome","keywords":"Streptococcus uberis; Metabolomics; Metabolite; Mastitis; Biology; Metabolome; Udder; Biochemistry; Microbiology; Streptococcus; Bacteria; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003831524,0.0005860614,0.0006156062,0.0009038519,0.0003622466,0.0007709644,0.0002165934,0.000617551,0.0009305971],"category_scores_gemma":[0.000158973,0.0001962234,0.0005810643,0.0007364485,0.0003193485,0.0002896147,0.0003881882,0.0005719351,0.0002545893],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004014479,"about_ca_system_score_gemma":0.0004004307,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001348546,"about_ca_topic_score_gemma":0.002120336,"domain_scores_codex":[0.9997222,0.00003348969,0.00001765392,0.00007578665,0.0001027518,0.00004818772],"domain_scores_gemma":[0.9998921,0.00001225156,0.00003288526,0.00001009898,0.00002510785,0.00002750917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006689705,0.00005207642,0.001660204,0.0001113171,0.00002594124,0.00007413639,0.00002591705,0.00008505983,0.9940445,0.0000339933,0.00007567225,0.00314218],"study_design_scores_gemma":[0.0000944139,0.002652837,0.2029587,0.00008361641,0.000348131,0.001295902,0.0003477314,0.003874599,0.7742627,0.0003268452,0.01369143,0.00006308004],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9750074,0.00561182,0.007965788,0.00035651,0.00008723154,0.000169216,0.009172807,0.0002115846,0.001417524],"genre_scores_gemma":[0.9368041,0.006561467,0.03121517,0.00090503,0.00008179805,0.0005226099,0.01919301,0.0001071922,0.004609761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001348546,"threshold_uncertainty_score":0.00311321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02135745875960163,"score_gpt":0.2312251505047735,"score_spread":0.2098676917451718,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}