{"id":"W2478833890","doi":"10.1016/j.tig.2016.06.005","title":"Genes in Hiding","year":2016,"lang":"en","type":"review","venue":"Trends in Genetics","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Gene; Genetics; Genome; Transcriptome; Computational biology; Genomics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001551069,0.0002881456,0.0005643804,0.0003049086,0.00002460524,0.00001286454,0.0004305906,0.0004933004,0.00007097114],"category_scores_gemma":[0.00001499731,0.0002497989,0.0002114969,0.0002558086,0.00005588069,0.000001101739,0.0002808564,0.0001524598,0.00004397324],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004760937,"about_ca_system_score_gemma":0.0000886972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006415798,"about_ca_topic_score_gemma":0.00008981685,"domain_scores_codex":[0.9986413,0.0001245697,0.0003413151,0.0004776281,0.00009414302,0.0003210266],"domain_scores_gemma":[0.9993509,0.00001535395,0.0001154001,0.0004487702,0.00001397406,0.00005558724],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000004413665,0.0000272041,0.0009009554,0.0004803917,0.00002815585,0.00001922817,0.000009106669,0.000002117953,0.00006458361,0.0000200408,0.0004271411,0.9980167],"study_design_scores_gemma":[0.0002304571,0.0000554401,0.0002371385,0.001143137,0.00003925007,0.00001276099,0.000002412882,8.695021e-7,0.0001929073,0.00003342075,0.9977233,0.000328909],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003118816,0.997232,0.00002178186,0.000008770877,0.0002087249,0.0001321328,0.00009968293,0.000005300566,0.001979773],"genre_scores_gemma":[0.000267291,0.997118,0.0003038036,0.00001916123,0.0002550405,0.00002813763,0.0002272226,0.00003394057,0.001747424],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9976878,"threshold_uncertainty_score":0.9999954,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05952766083787956,"score_gpt":0.3471872397795724,"score_spread":0.2876595789416928,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}