{"id":"W2481643928","doi":"10.4049/jimmunol.1600096","title":"Clonal Characteristics of Circulating B Lymphocyte Repertoire in Primary Biliary Cholangitis","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Somatic hypermutation; Biology; Immunology; Primary biliary cirrhosis; Somatic evolution in cancer; Pathogenesis; Immune system; Somatic cell; Lymphocyte; Repertoire; Autoantibody; Ursodeoxycholic acid; Antibody; Gene; B cell; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002041718,0.0001451768,0.000195412,0.0009199388,0.0001823009,0.0002285274,0.0001067775,0.0002184059,0.0008280106],"category_scores_gemma":[0.0008312094,0.0001027071,0.00008710589,0.0003794627,0.0001754495,0.0001344857,0.0001722296,0.0001637931,0.0001281854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008947937,"about_ca_system_score_gemma":0.00006089405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003036553,"about_ca_topic_score_gemma":0.0003595484,"domain_scores_codex":[0.999823,0.00005376589,0.00001541968,0.00003848618,0.00003971862,0.00002971813],"domain_scores_gemma":[0.9996711,0.000120887,0.00008024565,0.00002560633,0.00004497391,0.00005724248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007591701,0.00006586785,0.73343,0.000116951,0.00007144054,0.001622859,0.000471526,0.0003782686,0.2323284,0.00008679231,0.0001932898,0.03047554],"study_design_scores_gemma":[0.00002284103,0.0004011474,0.9765524,0.00001951836,0.00006570019,0.009189726,0.0002306286,0.0008610782,0.01163017,0.000168588,0.000848315,0.000009854827],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990008,0.0004966743,0.0002133145,0.00000804689,0.00000174889,0.000003242178,0.00004011399,0.000006918024,0.0002290819],"genre_scores_gemma":[0.999463,0.0001552746,0.0002093164,0.00001344311,0.000007746586,0.0000058711,0.00007946147,0.000002656824,0.00006315122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009199388,"threshold_uncertainty_score":0.002769947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01179270200945248,"score_gpt":0.232795720442753,"score_spread":0.2210030184333006,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}