{"id":"W2488411737","doi":"10.1016/b978-0-12-382219-2.00773-0","title":"UmuD and UmuD′ Proteins","year":2012,"lang":"en","type":"book-chapter","venue":"Handbook of Proteolytic Enzymes","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Signal peptide; Signal peptidase; Secretion; Cytoplasm; Escherichia coli; Serine; Biochemistry; Enzyme; Bacteria; Lysine; Transport protein; Membrane protein; Biology; Secretory protein; Membrane; Peptide sequence; Amino acid; Chemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001516973,0.0004134364,0.00046933,0.0001011199,0.00005679792,0.00001865108,0.0002544943,0.001116602,0.0001985423],"category_scores_gemma":[0.0000347088,0.0003738592,0.0001435556,0.00001531106,0.0004513123,0.000002947845,0.0003639829,0.0002472516,0.0000275731],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001183846,"about_ca_system_score_gemma":0.0001138868,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009062385,"about_ca_topic_score_gemma":0.00001659386,"domain_scores_codex":[0.9985972,0.0000173779,0.0004004543,0.0004912695,0.0001646785,0.0003290187],"domain_scores_gemma":[0.998856,0.000008115707,0.0003214962,0.0005915292,0.000102803,0.0001200306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001289427,0.00004144748,0.00002693415,0.0002887069,0.0002177252,0.000003442998,0.00004087427,2.498049e-7,0.9548185,0.02086579,0.00135036,0.02221704],"study_design_scores_gemma":[0.0004207285,0.0006244636,0.00002967313,0.0003341006,0.00009285469,0.00003682967,0.000004543404,8.461203e-7,0.774916,0.003075892,0.2200603,0.000403773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"review","genre_gemma":"other","genre_scores_codex":[0.05361971,0.6087189,0.00516389,0.001351115,0.001952633,0.01356068,0.001004255,0.0002902439,0.3143386],"genre_scores_gemma":[0.2067748,0.03026889,0.02983018,0.0004212007,0.003324143,0.0001575914,0.0005258963,0.0004832619,0.728214],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.57845,"threshold_uncertainty_score":0.9998713,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01155310156503595,"score_gpt":0.2136019848762858,"score_spread":0.2020488833112499,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}