{"id":"W2489343647","doi":"10.1128/mbio.00509-16","title":"IncA/C Conjugative Plasmids Mobilize a New Family of Multidrug Resistance Islands in Clinical Vibrio cholerae Non-O1/Non-O139 Isolates from Haiti","year":2016,"lang":"en","type":"article","venue":"mBio","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"National Institutes of Health; National Institute for Health and Care Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Vibrio cholerae; Genomic island; Biology; Microbiology; Integron; Multiple drug resistance; Salmonella; Cholera; Plasmid; Spectinomycin; Antibiotic resistance; Mobile genetic elements; Tetracycline; Genetics; Virology; Gene; Drug resistance; Antibiotics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006958572,0.0003386451,0.0002069104,0.0004406161,0.0002750535,0.0003452613,0.0002314994,0.0003471875,0.001035054],"category_scores_gemma":[0.0002268523,0.0001286531,0.0002287748,0.0004084113,0.0003216585,0.0001285171,0.0003484747,0.000483604,0.0002033461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00025778,"about_ca_system_score_gemma":0.0003598087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004996772,"about_ca_topic_score_gemma":0.006002899,"domain_scores_codex":[0.9998443,0.000008134409,0.00001652231,0.00004688482,0.00004291345,0.0000411441],"domain_scores_gemma":[0.9998086,0.00003109793,0.00005789174,0.0000232851,0.00003968348,0.00003937406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004164663,0.0001780313,0.07740302,0.0001474246,0.00003402603,0.0006241665,0.000611187,0.00009698024,0.913199,0.00008335555,0.000124865,0.007081328],"study_design_scores_gemma":[0.00003888058,0.00113044,0.7749973,0.00003829108,0.000143388,0.007733338,0.001264532,0.0007176013,0.2094073,0.00006491407,0.0044407,0.00002333386],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999047,0.0001362903,0.0001773573,0.00002598704,0.000004113433,0.00002595934,0.0002598115,0.00000869108,0.0003146053],"genre_scores_gemma":[0.996445,0.0001611108,0.0012807,0.00003167053,0.000007581886,0.00002152781,0.001247149,0.000007112111,0.0007980763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004996772,"threshold_uncertainty_score":0.009935379,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01708218187033723,"score_gpt":0.3042290167474092,"score_spread":0.2871468348770719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}