{"id":"W2489687516","doi":"10.3934/microbiol.2016.3.278","title":"Incidence of Top 6 shiga toxigenic &lt;em&gt;Escherichia coli&lt;/em&gt; within two Ontario beef processing facilities: Challenges in screening and confirmation testing","year":2016,"lang":"en","type":"article","venue":"AIMS Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Serotype; Escherichia coli; Microbiology; Biology; Shiga toxin; Incubation; Veterinary medicine; Food science; Gene; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000489399,0.0003419811,0.0002327456,0.0007218809,0.0006987413,0.0009472395,0.000495424,0.0004023072,0.0007575402],"category_scores_gemma":[0.001343043,0.0003740662,0.0001993612,0.000631989,0.000661934,0.000317862,0.0006279165,0.0003212619,0.0001439543],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002491426,"about_ca_system_score_gemma":0.002239087,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.3199373,"about_ca_topic_score_gemma":0.5334351,"domain_scores_codex":[0.9986565,0.00007675489,0.00006211558,0.0001775066,0.0007214283,0.0003056049],"domain_scores_gemma":[0.9986827,0.0001377279,0.0004482316,0.00004726322,0.0004155542,0.0002684225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001821523,0.00004895887,0.9762308,0.00005885288,0.00001459802,0.000682146,0.001730379,0.0001328022,0.01624455,0.0000174798,0.00009047827,0.004566741],"study_design_scores_gemma":[0.000002091888,0.0002221992,0.9960032,0.000008128151,0.000009694032,0.0002849842,0.001773414,0.0001521777,0.001379097,0.000004349993,0.0001551477,0.000005479563],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995196,0.00003386731,0.00005431111,0.00001963457,9.166639e-7,0.00001048196,0.0001071564,0.000003013731,0.0002511088],"genre_scores_gemma":[0.9992355,0.00008250349,0.0001789588,0.00001144679,0.000002095329,0.000003965829,0.0001650433,0.000001216288,0.0003192279],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6800627,"threshold_uncertainty_score":0.6361501,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03310791878487017,"score_gpt":0.2673096343667223,"score_spread":0.2342017155818521,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}