{"id":"W2490499758","doi":"10.1371/journal.pone.0159676","title":"Nutrient Deprivation Affects Salmonella Invasion and Its Interaction with the Gastrointestinal Microbiota","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"Ciência sem Fronteiras; Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Michael Smith Health Research BC","keywords":"Salmonella; Microbiology; Gut flora; Microbiome; Biology; Nutrient; Chemistry; Bacteria; Bioinformatics; Biochemistry; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009520261,0.0002553088,0.0002745381,0.0001337566,0.0001339239,0.0003198393,0.0001572088,0.0003157429,0.0009149954],"category_scores_gemma":[0.0001476274,0.0001320926,0.0001888279,0.0000876677,0.000233713,0.0001628895,0.0002408768,0.0003974432,0.0002058916],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001940225,"about_ca_system_score_gemma":0.0002636216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001247445,"about_ca_topic_score_gemma":0.001710499,"domain_scores_codex":[0.9998331,0.00004853475,0.00001148291,0.00002547014,0.0000291457,0.00005219573],"domain_scores_gemma":[0.9998766,0.00002321936,0.00002833658,0.000008648024,0.00001587151,0.00004728395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001199935,0.00006956374,0.001007887,0.00005773844,0.00000636025,0.00007123329,0.00002944464,0.00003696113,0.9963331,0.00002506844,0.00003411861,0.001128448],"study_design_scores_gemma":[0.00004186256,0.003881062,0.1271215,0.00002661773,0.00004841372,0.0004727835,0.0003351925,0.001378131,0.8635324,0.00009222336,0.003041614,0.00002812222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978667,0.001072854,0.0001701472,0.00008140404,0.00001857902,0.000008200038,0.000129679,0.00001005639,0.0006424126],"genre_scores_gemma":[0.9978889,0.0004692359,0.0003622642,0.00006219766,0.000008017835,0.0000128387,0.0001750194,0.000005834502,0.001015799],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001247445,"threshold_uncertainty_score":0.003060937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04696691091913121,"score_gpt":0.2062359124690637,"score_spread":0.1592690015499325,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}