{"id":"W2494142260","doi":"10.1097/qad.0000000000001201","title":"Standard vaccines increase HIV-1 transcription during antiretroviral therapy","year":2016,"lang":"en","type":"article","venue":"AIDS","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Université du Québec","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse; National Center for Advancing Translational Sciences; National Institute of Mental Health","keywords":"Vaccination; Viremia; Virology; Peripheral blood mononuclear cell; Immunology; Immune system; Medicine; CD8; T cell; DNA vaccination; Biology; Virus; In vitro; Immunization","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009701864,0.0001047241,0.000137578,0.00007504168,0.0001277746,0.000008935867,0.00009233431,0.00007754862,0.001835802],"category_scores_gemma":[0.00002233789,0.00005899421,0.00006977713,0.00006142206,0.00006393959,0.0001148055,0.00001536328,0.00006617195,0.002034546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004509105,"about_ca_system_score_gemma":0.00003148996,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007077184,"about_ca_topic_score_gemma":0.000005732415,"domain_scores_codex":[0.9992685,0.0001156846,0.0001116147,0.0001756983,0.00003376947,0.0002947535],"domain_scores_gemma":[0.9997025,0.00004037218,0.00002047239,0.0001740825,0.00003335497,0.0000292144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009606836,0.00006293547,0.1352156,0.000003819359,0.0001173085,0.00001510248,0.00006981129,2.601225e-8,0.8038859,0.0001289202,0.001043695,0.05849626],"study_design_scores_gemma":[0.009982394,0.001817376,0.1863722,0.00003346876,0.00001651075,0.00003915416,0.00004667731,4.020207e-8,0.7607903,0.000128251,0.04061542,0.0001581709],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966514,0.001727707,0.0001500502,0.0003471259,0.000132052,0.0001342708,0.0002011383,0.00007202351,0.0005843038],"genre_scores_gemma":[0.9921134,0.0006673472,0.00003473672,0.00002508082,0.00003375427,0.00002190091,0.00005912757,0.0000105711,0.007034059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05833808,"threshold_uncertainty_score":0.9990767,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01168243480778276,"score_gpt":0.2480659897847361,"score_spread":0.2363835549769533,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}