{"id":"W2495987436","doi":"10.1073/pnas.1608853113","title":"The enigma of the apparent disappearance of Eurasian highly pathogenic H5 clade 2.3.4.4 influenza A viruses in North American waterfowl","year":2016,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Waterfowl; Biology; Highly pathogenic; Outbreak; Influenza A virus subtype H5N1; Clade; Zoology; Virology; Ecology; Virus; Phylogenetics; Gene; Habitat; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008808106,0.0002261127,0.0001604791,0.0007016737,0.001752684,0.002111935,0.0007041563,0.001161004,0.001307412],"category_scores_gemma":[0.001000847,0.000155919,0.0002080995,0.0005647245,0.004447111,0.002528349,0.0006976015,0.001648681,0.0001959966],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00254016,"about_ca_system_score_gemma":0.002575645,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1215253,"about_ca_topic_score_gemma":0.1845208,"domain_scores_codex":[0.9997067,0.0000251592,0.00001268076,0.0001001934,0.00008289376,0.00007234398],"domain_scores_gemma":[0.9992331,0.0001044532,0.0003042948,0.00006451582,0.0001852877,0.000108358],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002072575,0.0001808481,0.4789905,0.00122279,0.0002470388,0.002120602,0.02164694,0.001104473,0.03387564,0.02356811,0.03216032,0.4046755],"study_design_scores_gemma":[0.000005062571,0.000129569,0.7719387,0.0008319682,0.000111497,0.002832041,0.02605841,0.0006930239,0.00308082,0.01292248,0.1813302,0.00006613151],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7497335,0.1410388,0.005652628,0.06575629,0.0009627418,0.00002570828,0.0007622066,0.00009997718,0.03596818],"genre_scores_gemma":[0.9081069,0.07323327,0.002238239,0.01064859,0.001029744,0.00001282891,0.0004205158,0.00001651645,0.004293497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8784747,"threshold_uncertainty_score":0.2416359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08918465959568818,"score_gpt":0.3784516564042901,"score_spread":0.2892669968086019,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}