{"id":"W2506753654","doi":"10.1099/ijsem.0.001376","title":"Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp. abscessus and Mycobacterium abscessus subsp. bolletii and designation of Mycobacterium abscessus subsp. massiliense comb. nov.","year":2016,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":231,"is_retracted":false,"has_abstract":true,"ca_institutions":"Shared Health","funders":"","keywords":"Mycobacterium abscessus; Biology; Microbiology; Subspecies; Mycobacterium; Genetics; Bacteria; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002073043,0.0009039431,0.002542955,0.001457811,0.0002370402,0.0001706215,0.0007880417,0.0007044933,0.0005595955],"category_scores_gemma":[0.000897027,0.0006744946,0.0004426764,0.0004390602,0.001197992,0.00118236,0.0004708472,0.0005783162,0.00003079716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005082143,"about_ca_system_score_gemma":0.0005573683,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002207876,"about_ca_topic_score_gemma":0.00005899508,"domain_scores_codex":[0.9925638,0.0008269834,0.003610127,0.0009571931,0.001071189,0.0009707251],"domain_scores_gemma":[0.9904734,0.001262674,0.003342819,0.0006499456,0.003584516,0.0006866487],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005631165,0.0008621074,0.1001901,0.01449572,0.002043499,0.0003732895,0.000935945,0.000006159312,0.8716546,0.000580073,0.002733204,0.0004941262],"study_design_scores_gemma":[0.02793947,0.006335985,0.8365234,0.03356294,0.003194148,0.023974,0.003500122,0.0003417633,0.05623374,0.001696345,0.004284829,0.002413258],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9830664,0.008291659,0.0009812095,0.002283174,0.002574824,0.001389419,0.0009976614,0.0000583105,0.0003573573],"genre_scores_gemma":[0.98942,0.007288055,0.001257691,0.0001808381,0.0007545004,0.00007521893,0.0002799041,0.0000874785,0.0006563216],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8154209,"threshold_uncertainty_score":0.9995706,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02218802618837088,"score_gpt":0.2633202072974533,"score_spread":0.2411321811090824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}