{"id":"W2511095854","doi":"10.1007/s00122-016-2762-7","title":"High-density marker profiling confirms ancestral genomes of Avena species and identifies D-genome chromosomes of hexaploid oat","year":2016,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Dalhousie University; Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; Engineering and Physical Sciences Research Council; Agriculture and Agri-Food Canada; Government of Canada","keywords":"Biology; Genome; Synteny; Genetics; Haplotype; Evolutionary biology; Allele; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001695456,0.0001520777,0.0003297275,0.00001244022,0.00007464143,0.00001938065,0.0001220968,0.0001042175,0.0002483967],"category_scores_gemma":[0.000009759765,0.00005456857,0.00004479261,0.0000729629,0.001483112,0.00001551572,0.0001279917,0.00005139637,0.000002596891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002710283,"about_ca_system_score_gemma":0.000005198941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004201117,"about_ca_topic_score_gemma":0.00001042981,"domain_scores_codex":[0.9990569,0.00003659653,0.0002772119,0.00026064,0.0001355818,0.0002330165],"domain_scores_gemma":[0.9995434,0.0001745674,0.00006667566,0.00006944601,0.00005497473,0.0000909634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006649203,0.00003149637,0.00382674,0.00002777626,0.00001419104,0.000001017019,0.00005070728,4.738338e-7,0.8779542,0.1051014,0.000003324157,0.01292222],"study_design_scores_gemma":[0.0002355652,0.000297585,0.1926877,0.00001874397,0.00003112549,0.000008231103,0.000165595,0.00000337837,0.741451,0.06477007,0.000165943,0.0001650672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977763,0.0008094701,0.00002548628,0.0003222074,0.00005118783,0.0001557681,0.0001090082,0.00001178094,0.0007387581],"genre_scores_gemma":[0.9969699,0.002338145,0.0004152234,0.00003077724,0.000138679,0.000004324536,0.00001278779,0.00000182153,0.00008837926],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.188861,"threshold_uncertainty_score":0.5464589,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01200969568913066,"score_gpt":0.196960527705491,"score_spread":0.1849508320163604,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}