{"id":"W2511867464","doi":"10.1128/aac.01130-16","title":"Complete Sequencing of Plasmids Containing <i>bla</i> <sub>OXA-163</sub> and <i>bla</i> <sub>OXA-48</sub> in Escherichia coli Sequence Type 131","year":2016,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"National Institute for Health and Care Research; Calgary Laboratory Services; Department of Health and Social Care; Wellcome Trust; Wellcome","keywords":"Plasmid; Escherichia coli; Biology; Genetics; Gene; Lineage (genetic); Enterobacteriaceae; Sequence (biology); Sequence analysis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002226846,0.0004863637,0.0003950941,0.0005073538,0.0002313846,0.000382484,0.0002872079,0.000349772,0.001402158],"category_scores_gemma":[0.001048011,0.0002463385,0.0007578947,0.0006784077,0.0002667308,0.0002257054,0.0003263661,0.0005626638,0.000858944],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000336351,"about_ca_system_score_gemma":0.0009464077,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00211925,"about_ca_topic_score_gemma":0.001887116,"domain_scores_codex":[0.9998023,0.00003337796,0.00002466884,0.00004075809,0.00005942535,0.00003949754],"domain_scores_gemma":[0.9990954,0.00023315,0.0002287471,0.0001239173,0.0001885394,0.000130194],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003585566,0.00007480771,0.002537614,0.0002080044,0.00001917068,0.0003726081,0.0001935382,0.0003522207,0.9832879,0.0004008922,0.0002419364,0.01195264],"study_design_scores_gemma":[0.0001710277,0.001752621,0.1631891,0.0001409149,0.0003104833,0.003333465,0.0004666035,0.002269621,0.8016955,0.0009243927,0.0256641,0.00008220001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9450697,0.0006445512,0.02912023,0.0001722678,0.00007058183,0.0004881732,0.02074953,0.0002537951,0.003431166],"genre_scores_gemma":[0.8893259,0.001019725,0.03380127,0.0001936959,0.00003902045,0.0002985379,0.06979383,0.0002205121,0.005307422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00211925,"threshold_uncertainty_score":0.004690707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01662422108269295,"score_gpt":0.239943835312688,"score_spread":0.223319614229995,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}