{"id":"W2513688259","doi":"10.1371/journal.pgen.1005876","title":"Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control","year":2016,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Banana Cultivation and Research","field":"Agricultural and Biological Sciences","cited_by":116,"is_retracted":false,"has_abstract":true,"ca_institutions":"Natural Resources Canada; University of British Columbia; Canadian Forest Service","funders":"Centre de Coopération Internationale en Recherche Agronomique pour le Développement; Wageningen University and Research; Joint Genome Institute; Genome Canada; Universidad Nacional de Colombia; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS); Office of Science; U.S. Department of Agriculture; Stichting Dioraphte; U.S. Department of Energy","keywords":"Mycosphaerella; Biology; Fungicide; Azoxystrobin; Plant disease resistance; Genome; Botany; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002781971,0.0002952381,0.0003623151,0.0000198636,0.0003681115,0.0001030424,0.0004365485,0.0001414822,0.0003857668],"category_scores_gemma":[0.0002938456,0.0001112612,0.0002320643,0.0004205533,0.0002098647,0.00006746037,0.0001504708,0.00008105941,0.0001366013],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001065873,"about_ca_system_score_gemma":0.00006267393,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002828439,"about_ca_topic_score_gemma":0.0002036541,"domain_scores_codex":[0.9975002,0.0001331296,0.0004305973,0.0006337983,0.0005567881,0.0007454333],"domain_scores_gemma":[0.9980799,0.0004317859,0.0001280486,0.0001724761,0.0004865033,0.000701319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001126721,0.0008039175,0.228916,0.000128395,0.0003143772,0.00006136726,0.0003878393,0.0002117676,0.4151136,0.001064885,0.01836225,0.3335089],"study_design_scores_gemma":[0.006185851,0.003215741,0.8479512,0.00066303,0.0005564775,0.00001860629,0.001315351,0.01945881,0.03220315,0.005782358,0.07966249,0.002986983],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852266,0.0008073726,0.0001916904,0.01029356,0.00008126948,0.00117576,0.001965211,0.00008272515,0.0001757801],"genre_scores_gemma":[0.9961941,0.0001841824,0.0009204734,0.001479873,0.0004459005,0.00008454912,0.00007644796,0.000005929384,0.0006085378],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6190352,"threshold_uncertainty_score":0.4537101,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03650497010853568,"score_gpt":0.2623344980482821,"score_spread":0.2258295279397464,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}