{"id":"W2513984945","doi":"10.1093/infdis/jiw398","title":"Viral Genome Sequencing Proves Nosocomial Transmission of Fatal Varicella","year":2016,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute for Health and Care Research","keywords":"Chickenpox; Medicine; Index case; Intensive care unit; Transmission (telecommunications); Virology; Rash; Intensive care; Isolation (microbiology); Virus; Intensive care medicine; Biology; Outbreak; Internal medicine; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000241038,0.0002680759,0.0001923045,0.0004506548,0.000526648,0.000516592,0.0001824283,0.0005379636,0.001213155],"category_scores_gemma":[0.001672986,0.000141229,0.0001981115,0.000196293,0.0002728108,0.0002695933,0.0003452456,0.0004957864,0.0003318815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000159399,"about_ca_system_score_gemma":0.0001529661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001315574,"about_ca_topic_score_gemma":0.001608865,"domain_scores_codex":[0.9997079,0.00003392464,0.00003238903,0.00006952592,0.000080971,0.00007535812],"domain_scores_gemma":[0.99949,0.0001977501,0.00007420228,0.00007424136,0.00009665627,0.00006706636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006158455,0.0003003344,0.7297007,0.0001398172,0.0001124835,0.05654909,0.003390082,0.000588149,0.1597923,0.001032168,0.001487928,0.04629105],"study_design_scores_gemma":[0.00004982979,0.001353742,0.6043891,0.0001064156,0.0003153762,0.2304349,0.00331559,0.006085092,0.1403334,0.001711046,0.01185709,0.00004850385],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967051,0.0002665917,0.001124504,0.0001194109,0.00002120175,0.00001420781,0.000204356,0.00002557788,0.001519039],"genre_scores_gemma":[0.9988762,0.0001302422,0.0005917713,0.00007499464,0.00001071185,0.000002873471,0.0001396988,0.000008119948,0.0001654527],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001315574,"threshold_uncertainty_score":0.004058421,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01071498253717024,"score_gpt":0.2559974254525851,"score_spread":0.2452824429154148,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}