{"id":"W2517460900","doi":"10.1136/jclinpath-2016-203866","title":"Gene of the month: <i>BAP1</i>","year":2016,"lang":"en","type":"review","venue":"Journal of Clinical Pathology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"BAP1; Cancer research; Deubiquitinating enzyme; Cancer syndrome; Germline mutation; Mesothelioma; Biology; Melanoma; Gene; Tumor suppressor gene; Renal cell carcinoma; Cancer; Mutation; Medicine; Carcinogenesis; Pathology; Ubiquitin; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001819282,0.0002169057,0.003991684,0.00009288789,0.00002710633,0.000001420101,0.0003270301,0.0009860775,0.0001007295],"category_scores_gemma":[0.002276161,0.00008679723,0.002739517,0.0001049999,0.0004344418,0.0000231779,0.0001047251,0.001121432,0.00007407995],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004304628,"about_ca_system_score_gemma":0.0009991887,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":2.853817e-7,"about_ca_topic_score_gemma":6.365161e-7,"domain_scores_codex":[0.9954786,0.001116277,0.002807285,0.0001861564,0.0002313716,0.0001802751],"domain_scores_gemma":[0.994085,0.001484251,0.003543726,0.0005145392,0.0002248781,0.000147601],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001417024,0.0006394907,0.003024652,0.0008640571,0.0009065387,0.002106196,0.000005384944,1.749805e-8,0.000001672021,0.00003108535,0.001439114,0.9908401],"study_design_scores_gemma":[0.002519309,0.001857198,0.002406266,0.006804205,0.00445021,0.007488748,0.000001215249,2.84737e-8,0.000006228305,0.0002967835,0.9740965,0.00007326929],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001230041,0.9938977,0.00001668599,0.0005929613,0.00266777,0.0002897812,0.00002129478,0.000003148918,0.001280666],"genre_scores_gemma":[0.0003036128,0.9967953,0.0005800637,0.0003768007,0.001086628,0.000003300346,0.000002461911,0.00002475615,0.0008270672],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9907668,"threshold_uncertainty_score":0.7605532,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.150960301372172,"score_gpt":0.4947736975815162,"score_spread":0.3438133962093443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}