{"id":"W2518596803","doi":"10.1016/j.jgar.2016.07.006","title":"A rapid loop-mediated isothermal amplification (LAMP) method for detection of the macrolide–streptogramin type B resistance gene msrA in Staphylococcus aureus","year":2016,"lang":"en","type":"article","venue":"Journal of Global Antimicrobial Resistance","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"","keywords":"MSRA; Loop-mediated isothermal amplification; Lincosamides; Gene; Biology; Primer (cosmetics); Corynebacterium glutamicum; Genetics; Staphylococcus aureus; Bacteria; DNA; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00120541,0.0004163702,0.001000266,0.0002020301,0.0001425719,0.0000406156,0.0006324828,0.0003281033,0.00002718335],"category_scores_gemma":[0.001818186,0.0002730429,0.0006082622,0.001481285,0.0004114581,0.0002380074,0.00007290117,0.0003525514,0.000006740137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008965972,"about_ca_system_score_gemma":0.0007555011,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003564929,"about_ca_topic_score_gemma":0.001374763,"domain_scores_codex":[0.9961026,0.0003077352,0.001765301,0.0005130462,0.0006356352,0.000675716],"domain_scores_gemma":[0.9951041,0.0004590923,0.002006835,0.0007015137,0.001538556,0.0001898885],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01198577,0.0003001314,0.006520446,0.0003172572,0.0001535591,0.00003063025,0.00005747112,0.00001455905,0.9706123,0.000216734,0.00450372,0.005287423],"study_design_scores_gemma":[0.008351401,0.0004909157,0.1300325,0.002956164,0.0003162008,0.00007657408,0.00007643091,0.00002910369,0.8153615,0.0007543797,0.04103199,0.0005228463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.937962,0.001859806,0.05294029,0.003991613,0.0009270554,0.001444251,0.0005060845,0.00003678158,0.0003321423],"genre_scores_gemma":[0.9726197,0.0006273738,0.02496571,0.0004417348,0.0002982021,0.00001477413,0.000005949558,0.0000569284,0.0009696322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1552508,"threshold_uncertainty_score":0.9999722,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01364314541450025,"score_gpt":0.2838358484551887,"score_spread":0.2701927030406884,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}