{"id":"W2519037588","doi":"10.1089/mdr.2016.0025","title":"A Novel Plasmid, pSx1, Harboring a New Tn <i>1696</i> Derivative from Extensively Drug-Resistant <i>Shewanella xiamenensis</i> Encoding OXA-416","year":2016,"lang":"en","type":"article","venue":"Microbial Drug Resistance","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Public Health Agency of Canada; Institut National de Santé Publique du Québec","funders":"","keywords":"Integron; Plasmid; Gene cassette; Biology; TetR; Transposable element; Microbiology; Multiple drug resistance; Transposon mutagenesis; Escherichia coli; Efflux; Operon; Genetics; Gene; Drug resistance; Genome; Repressor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003100117,0.0007666565,0.0007151593,0.0001072172,0.0003330423,0.0001784144,0.0009020427,0.0002972522,0.00008261973],"category_scores_gemma":[0.0003772491,0.0006622411,0.0002870794,0.0002870215,0.0004504017,0.00004439695,0.0004087759,0.0002451605,0.00009270536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002222568,"about_ca_system_score_gemma":0.0004733651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003400398,"about_ca_topic_score_gemma":0.001977128,"domain_scores_codex":[0.9957673,0.0001574435,0.000902023,0.001675615,0.0004186909,0.001078956],"domain_scores_gemma":[0.9973241,0.0002029627,0.0005543372,0.001217191,0.0003261076,0.0003753176],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001459296,0.00008447652,0.0006083701,0.00004593006,0.000155585,0.00003994556,0.0002589665,0.000004620922,0.9386259,0.0001581364,0.05822721,0.0003315304],"study_design_scores_gemma":[0.002138327,0.00003346717,0.00187544,0.0007043226,0.00005575096,0.000008820149,0.0001538973,0.000001141762,0.804311,0.000148317,0.1897332,0.0008362347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9778574,0.002008775,0.01388768,0.002226737,0.0009176072,0.0005742444,0.0006783008,0.0001152006,0.001734056],"genre_scores_gemma":[0.9392822,0.0007875452,0.02376665,0.001497716,0.001169896,0.00002130646,0.0001013857,0.000194609,0.03317869],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1343149,"threshold_uncertainty_score":0.9995829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00917987528492798,"score_gpt":0.213272758334617,"score_spread":0.204092883049689,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}