{"id":"W2519998022","doi":"10.1007/s10867-016-9429-0","title":"A new definition and properties of the similarity value between two protein structures","year":2016,"lang":"en","type":"article","venue":"Journal of Biological Physics","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Similarity (geometry); Structural similarity; Value (mathematics); Measure (data warehouse); Protein structure; Similarity measure; Computer science; Computational biology; Biological system; Data mining; Bioinformatics; Artificial intelligence; Chemistry; Machine learning; Biology; Image (mathematics); Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004885111,0.00102797,0.001694483,0.008921497,0.001267005,0.005522774,0.003035736,0.002749678,0.002370486],"category_scores_gemma":[0.02191522,0.0005892543,0.001378547,0.005768234,0.005505788,0.01609731,0.004845568,0.004034857,0.0006494364],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001187155,"about_ca_system_score_gemma":0.0006983342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002888413,"about_ca_topic_score_gemma":0.0002092708,"domain_scores_codex":[0.993233,0.001661203,0.001017862,0.001747975,0.002009841,0.0003299753],"domain_scores_gemma":[0.9829102,0.009041512,0.002293088,0.002129743,0.002344908,0.00128049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0003121135,0.0001741305,0.008510148,0.0003879223,0.0002083025,0.0008246611,0.0009099371,0.005940616,0.02279891,0.8886734,0.00337043,0.0678894],"study_design_scores_gemma":[0.00006282328,0.0004178534,0.005394947,0.0001934327,0.0001713651,0.004602792,0.0005766638,0.1022761,0.008183069,0.8624309,0.01550878,0.0001813331],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1399583,0.004341437,0.8396168,0.001924485,0.0009987144,0.0001381906,0.0007083046,0.0005180778,0.01179562],"genre_scores_gemma":[0.744657,0.001737069,0.245526,0.0007942639,0.002113762,0.0003596983,0.001154749,0.0003784841,0.00327894],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008921497,"threshold_uncertainty_score":0.02583522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0330280071116525,"score_gpt":0.2464957730756866,"score_spread":0.2134677659640341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}