{"id":"W2523610569","doi":"10.1261/rna.057513.116","title":"ARiBo pull-down for riboproteomic studies based on label-free quantitative mass spectrometry","year":2016,"lang":"en","type":"article","venue":"RNA","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Parkinson Society Canada","keywords":"Biology; RNA; Interactome; Computational biology; microRNA; Biogenesis; Cell biology; RNA-binding protein; Function (biology); Mass spectrometry; Biochemistry; Chemistry; Gene; Chromatography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001916316,0.0033095,0.001772062,0.002237884,0.0007940597,0.001161838,0.001872106,0.001398392,0.005212999],"category_scores_gemma":[0.001200327,0.0009978143,0.001433545,0.001275736,0.0006622873,0.001359244,0.001085517,0.003024947,0.005718368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004563293,"about_ca_system_score_gemma":0.0003936336,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003642111,"about_ca_topic_score_gemma":0.0007629007,"domain_scores_codex":[0.998151,0.0003846279,0.000183299,0.000430845,0.0006241234,0.0002261111],"domain_scores_gemma":[0.99887,0.0004239736,0.0001969039,0.0001666274,0.0002573363,0.00008516704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007902928,0.0000637077,0.00005772056,0.000207896,0.00003081314,0.00005629019,0.00002788768,0.00005206855,0.9970728,0.0002518737,0.0001910749,0.001908817],"study_design_scores_gemma":[0.00002374648,0.0001101605,0.001218833,0.00002630181,0.00004194727,0.0002820283,0.00002751444,0.003464688,0.986119,0.0002368174,0.008416031,0.00003283668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.159443,0.006945611,0.8123179,0.0008632477,0.0007162464,0.001603559,0.006986135,0.005189592,0.005934741],"genre_scores_gemma":[0.1569931,0.009699012,0.7937513,0.001153463,0.000395925,0.004705206,0.01588587,0.001837296,0.01557893],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.005212999,"threshold_uncertainty_score":0.01743919,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03650589873283509,"score_gpt":0.3365316789647855,"score_spread":0.3000257802319504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}