{"id":"W2523838195","doi":"10.21769/bioprotoc.1738","title":"RAB21 Activity Assay Using GST-fused APPL1","year":2016,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of General Medical Sciences","keywords":"Rab; GTPase; Effector; Guanine nucleotide exchange factor; GTP'; Transport protein","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009034369,0.001702527,0.0009621625,0.001025414,0.0005705403,0.0006071256,0.001069847,0.0007509539,0.002958865],"category_scores_gemma":[0.0004432316,0.0005624554,0.0008018577,0.001657755,0.0003359042,0.0004973474,0.0007900711,0.001857967,0.003628656],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009245732,"about_ca_system_score_gemma":0.000485476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001169045,"about_ca_topic_score_gemma":0.001943568,"domain_scores_codex":[0.9984115,0.0003251846,0.0002380645,0.0003288493,0.0005132117,0.0001831172],"domain_scores_gemma":[0.9994898,0.0001347178,0.00006235421,0.0001005474,0.000148763,0.0000638279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004520338,0.00008928513,0.00008516446,0.00008876308,0.00001485737,0.00002474665,0.00002874754,0.00004334243,0.9983826,0.00006865781,0.000137509,0.0009912148],"study_design_scores_gemma":[0.00001169356,0.0001632456,0.001511603,0.0000137198,0.00002968112,0.0001152857,0.00002586543,0.0009039783,0.9915445,0.00005892543,0.005607132,0.00001444012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.8264073,0.01026645,0.1273889,0.001153133,0.0006771767,0.001470496,0.008576646,0.002873324,0.02118658],"genre_scores_gemma":[0.7433454,0.01183715,0.1268425,0.000401492,0.0001830502,0.001781528,0.05325835,0.0006839373,0.06166657],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.002958865,"threshold_uncertainty_score":0.009898365,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02464972874758621,"score_gpt":0.2944660219351166,"score_spread":0.2698162931875304,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}